Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC20.6■□□□□ 0.89
Ubr3Q5U430 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ubr3Q5U430 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC20.6■□□□□ 0.89
Ubr3Q5U430 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Ubr3Q5U430 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ubr3Q5U430 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ubr3Q5U430 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Ubr3Q5U430 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ubr3Q5U430 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ubr3Q5U430 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ubr3Q5U430 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
Ubr3Q5U430 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ubr3Q5U430 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC20.59■□□□□ 0.89
Ubr3Q5U430 Gm4459-201ENSMUST00000118750 468 ntBASIC20.59■□□□□ 0.89
Ubr3Q5U430 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ubr3Q5U430 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC20.59■□□□□ 0.89
Ubr3Q5U430 Gm24513-201ENSMUST00000174964 138 ntBASIC20.59■□□□□ 0.89
Ubr3Q5U430 Gm7507-201ENSMUST00000183053 1008 ntBASIC20.59■□□□□ 0.89
Ubr3Q5U430 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ubr3Q5U430 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ubr3Q5U430 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ubr3Q5U430 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ubr3Q5U430 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
Ubr3Q5U430 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
Ubr3Q5U430 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.58■□□□□ 0.89
Ubr3Q5U430 AC225888.1-201ENSMUST00000227184 728 ntBASIC20.58■□□□□ 0.89
Ubr3Q5U430 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ubr3Q5U430 AC122901.1-201ENSMUST00000214203 1790 ntBASIC20.58■□□□□ 0.89
Ubr3Q5U430 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Ubr3Q5U430 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ubr3Q5U430 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ubr3Q5U430 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ubr3Q5U430 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Ubr3Q5U430 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ubr3Q5U430 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ubr3Q5U430 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ubr3Q5U430 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ubr3Q5U430 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ubr3Q5U430 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Ubr3Q5U430 Gm8097-201ENSMUST00000117903 829 ntBASIC20.57■□□□□ 0.88
Ubr3Q5U430 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC20.57■□□□□ 0.88
Ubr3Q5U430 Gm37584-201ENSMUST00000193595 1290 ntBASIC20.57■□□□□ 0.88
Ubr3Q5U430 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ubr3Q5U430 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ubr3Q5U430 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ubr3Q5U430 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Ubr3Q5U430 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.57■□□□□ 0.88
Ubr3Q5U430 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ubr3Q5U430 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.57■□□□□ 0.88
Ubr3Q5U430 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Ubr3Q5U430 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ubr3Q5U430 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.56■□□□□ 0.88
Ubr3Q5U430 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ubr3Q5U430 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Ubr3Q5U430 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ubr3Q5U430 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Ubr3Q5U430 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ubr3Q5U430 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Ubr3Q5U430 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ubr3Q5U430 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC20.56■□□□□ 0.88
Ubr3Q5U430 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ubr3Q5U430 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ubr3Q5U430 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Ubr3Q5U430 Gm6089-201ENSMUST00000197666 938 ntBASIC20.56■□□□□ 0.88
Ubr3Q5U430 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC20.56■□□□□ 0.88
Ubr3Q5U430 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Ubr3Q5U430 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ubr3Q5U430 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ubr3Q5U430 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ubr3Q5U430 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ubr3Q5U430 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ubr3Q5U430 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC20.55■□□□□ 0.88
Ubr3Q5U430 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ubr3Q5U430 Auts2-212ENSMUST00000178555 309 ntBASIC20.55■□□□□ 0.88
Ubr3Q5U430 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ubr3Q5U430 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ubr3Q5U430 AC154757.1-201ENSMUST00000228289 336 ntBASIC20.55■□□□□ 0.88
Ubr3Q5U430 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ubr3Q5U430 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ubr3Q5U430 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ubr3Q5U430 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ubr3Q5U430 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Ubr3Q5U430 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ubr3Q5U430 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ubr3Q5U430 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ubr3Q5U430 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ubr3Q5U430 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ubr3Q5U430 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ubr3Q5U430 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ubr3Q5U430 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC20.54■□□□□ 0.88
Ubr3Q5U430 Gm6184-201ENSMUST00000120403 1261 ntBASIC20.54■□□□□ 0.88
Ubr3Q5U430 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ubr3Q5U430 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
Ubr3Q5U430 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC20.54■□□□□ 0.88
Ubr3Q5U430 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ubr3Q5U430 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ubr3Q5U430 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ubr3Q5U430 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ubr3Q5U430 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ubr3Q5U430 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms