Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.36■□□□□ 0.85
Vps54Q5SPW0 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Vps54Q5SPW0 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Vps54Q5SPW0 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Vps54Q5SPW0 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Vps54Q5SPW0 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vps54Q5SPW0 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vps54Q5SPW0 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vps54Q5SPW0 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Vps54Q5SPW0 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vps54Q5SPW0 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vps54Q5SPW0 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Vps54Q5SPW0 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC20.35■□□□□ 0.85
Vps54Q5SPW0 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC20.35■□□□□ 0.85
Vps54Q5SPW0 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vps54Q5SPW0 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vps54Q5SPW0 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Vps54Q5SPW0 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vps54Q5SPW0 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Vps54Q5SPW0 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vps54Q5SPW0 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vps54Q5SPW0 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Vps54Q5SPW0 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC20.34■□□□□ 0.85
Vps54Q5SPW0 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Vps54Q5SPW0 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vps54Q5SPW0 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vps54Q5SPW0 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vps54Q5SPW0 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vps54Q5SPW0 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vps54Q5SPW0 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vps54Q5SPW0 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vps54Q5SPW0 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vps54Q5SPW0 Gm6728-201ENSMUST00000178117 1065 ntBASIC20.34■□□□□ 0.85
Vps54Q5SPW0 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vps54Q5SPW0 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vps54Q5SPW0 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Vps54Q5SPW0 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Vps54Q5SPW0 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Vps54Q5SPW0 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vps54Q5SPW0 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vps54Q5SPW0 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vps54Q5SPW0 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Vps54Q5SPW0 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vps54Q5SPW0 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vps54Q5SPW0 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Vps54Q5SPW0 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC20.33■□□□□ 0.85
Vps54Q5SPW0 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Vps54Q5SPW0 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Vps54Q5SPW0 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vps54Q5SPW0 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vps54Q5SPW0 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vps54Q5SPW0 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC20.33■□□□□ 0.85
Vps54Q5SPW0 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vps54Q5SPW0 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vps54Q5SPW0 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vps54Q5SPW0 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Vps54Q5SPW0 Phf7-203ENSMUST00000226565 1971 ntBASIC20.33■□□□□ 0.84
Vps54Q5SPW0 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Vps54Q5SPW0 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC20.33■□□□□ 0.84
Vps54Q5SPW0 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Vps54Q5SPW0 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Vps54Q5SPW0 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Vps54Q5SPW0 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Vps54Q5SPW0 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Vps54Q5SPW0 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vps54Q5SPW0 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vps54Q5SPW0 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vps54Q5SPW0 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vps54Q5SPW0 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vps54Q5SPW0 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Vps54Q5SPW0 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vps54Q5SPW0 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC20.32■□□□□ 0.84
Vps54Q5SPW0 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Vps54Q5SPW0 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Vps54Q5SPW0 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vps54Q5SPW0 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vps54Q5SPW0 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vps54Q5SPW0 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vps54Q5SPW0 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vps54Q5SPW0 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Vps54Q5SPW0 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Vps54Q5SPW0 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vps54Q5SPW0 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vps54Q5SPW0 Gm13186-201ENSMUST00000118031 316 ntBASIC20.31■□□□□ 0.84
Vps54Q5SPW0 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC20.31■□□□□ 0.84
Vps54Q5SPW0 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Vps54Q5SPW0 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Vps54Q5SPW0 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Vps54Q5SPW0 AC130671.1-201ENSMUST00000227384 1237 ntBASIC20.31■□□□□ 0.84
Vps54Q5SPW0 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vps54Q5SPW0 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vps54Q5SPW0 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Vps54Q5SPW0 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vps54Q5SPW0 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Vps54Q5SPW0 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Vps54Q5SPW0 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Vps54Q5SPW0 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vps54Q5SPW0 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Vps54Q5SPW0 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vps54Q5SPW0 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms