Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.47■□□□□ 0.71
Ccdc88aQ5SNZ0 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc88aQ5SNZ0 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc88aQ5SNZ0 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc88aQ5SNZ0 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc88aQ5SNZ0 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC19.47■□□□□ 0.71
Ccdc88aQ5SNZ0 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc88aQ5SNZ0 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc88aQ5SNZ0 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc88aQ5SNZ0 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc88aQ5SNZ0 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Ccdc88aQ5SNZ0 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc88aQ5SNZ0 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc88aQ5SNZ0 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc88aQ5SNZ0 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc88aQ5SNZ0 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc88aQ5SNZ0 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc88aQ5SNZ0 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc88aQ5SNZ0 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc88aQ5SNZ0 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC19.45■□□□□ 0.7
Ccdc88aQ5SNZ0 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC19.45■□□□□ 0.7
Ccdc88aQ5SNZ0 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.45■□□□□ 0.7
Ccdc88aQ5SNZ0 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.45■□□□□ 0.7
Ccdc88aQ5SNZ0 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.45■□□□□ 0.7
Ccdc88aQ5SNZ0 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc88aQ5SNZ0 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc88aQ5SNZ0 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc88aQ5SNZ0 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc88aQ5SNZ0 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC19.45■□□□□ 0.7
Ccdc88aQ5SNZ0 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc88aQ5SNZ0 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc88aQ5SNZ0 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc88aQ5SNZ0 Gm11452-201ENSMUST00000122376 690 ntBASIC19.44■□□□□ 0.7
Ccdc88aQ5SNZ0 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc88aQ5SNZ0 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC19.44■□□□□ 0.7
Ccdc88aQ5SNZ0 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Ccdc88aQ5SNZ0 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc88aQ5SNZ0 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc88aQ5SNZ0 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc88aQ5SNZ0 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc88aQ5SNZ0 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc88aQ5SNZ0 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc88aQ5SNZ0 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc88aQ5SNZ0 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc88aQ5SNZ0 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.43■□□□□ 0.7
Ccdc88aQ5SNZ0 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Ccdc88aQ5SNZ0 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Ccdc88aQ5SNZ0 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.43■□□□□ 0.7
Ccdc88aQ5SNZ0 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc88aQ5SNZ0 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc88aQ5SNZ0 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc88aQ5SNZ0 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc88aQ5SNZ0 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc88aQ5SNZ0 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc88aQ5SNZ0 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc88aQ5SNZ0 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc88aQ5SNZ0 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc88aQ5SNZ0 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc88aQ5SNZ0 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc88aQ5SNZ0 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc88aQ5SNZ0 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc88aQ5SNZ0 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc88aQ5SNZ0 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc88aQ5SNZ0 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC19.43■□□□□ 0.7
Ccdc88aQ5SNZ0 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.43■□□□□ 0.7
Ccdc88aQ5SNZ0 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC19.43■□□□□ 0.7
Ccdc88aQ5SNZ0 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc88aQ5SNZ0 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC19.43■□□□□ 0.7
Ccdc88aQ5SNZ0 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc88aQ5SNZ0 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc88aQ5SNZ0 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC19.42■□□□□ 0.7
Ccdc88aQ5SNZ0 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc88aQ5SNZ0 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Ccdc88aQ5SNZ0 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC19.42■□□□□ 0.7
Ccdc88aQ5SNZ0 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc88aQ5SNZ0 Phf7-203ENSMUST00000226565 1971 ntBASIC19.42■□□□□ 0.7
Ccdc88aQ5SNZ0 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc88aQ5SNZ0 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc88aQ5SNZ0 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc88aQ5SNZ0 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc88aQ5SNZ0 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc88aQ5SNZ0 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.42■□□□□ 0.7
Ccdc88aQ5SNZ0 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.42■□□□□ 0.7
Ccdc88aQ5SNZ0 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc88aQ5SNZ0 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc88aQ5SNZ0 Gm6623-201ENSMUST00000173570 544 ntBASIC19.41■□□□□ 0.7
Ccdc88aQ5SNZ0 AC125350.1-201ENSMUST00000225115 903 ntBASIC19.41■□□□□ 0.7
Ccdc88aQ5SNZ0 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC19.41■□□□□ 0.7
Ccdc88aQ5SNZ0 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc88aQ5SNZ0 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc88aQ5SNZ0 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc88aQ5SNZ0 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc88aQ5SNZ0 Gm15794-201ENSMUST00000120182 631 ntBASIC19.41■□□□□ 0.7
Ccdc88aQ5SNZ0 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc88aQ5SNZ0 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc88aQ5SNZ0 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc88aQ5SNZ0 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc88aQ5SNZ0 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc88aQ5SNZ0 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Ccdc88aQ5SNZ0 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms