Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-1Q5R1I8 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-1Q5R1I8 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-1Q5R1I8 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-1Q5R1I8 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC11.56□□□□□ -0.56
Trav3-1Q5R1I8 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-1Q5R1I8 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-1Q5R1I8 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav3-1Q5R1I8 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-1Q5R1I8 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-1Q5R1I8 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-1Q5R1I8 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-1Q5R1I8 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-1Q5R1I8 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC11.56□□□□□ -0.56
Trav3-1Q5R1I8 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-1Q5R1I8 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-1Q5R1I8 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-1Q5R1I8 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-1Q5R1I8 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-1Q5R1I8 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav3-1Q5R1I8 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-1Q5R1I8 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trav3-1Q5R1I8 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-1Q5R1I8 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trav3-1Q5R1I8 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-1Q5R1I8 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-1Q5R1I8 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trav3-1Q5R1I8 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav3-1Q5R1I8 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-1Q5R1I8 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-1Q5R1I8 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-1Q5R1I8 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Trav3-1Q5R1I8 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trav3-1Q5R1I8 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-1Q5R1I8 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-1Q5R1I8 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-1Q5R1I8 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-1Q5R1I8 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-1Q5R1I8 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-1Q5R1I8 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-1Q5R1I8 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-1Q5R1I8 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-1Q5R1I8 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Trav3-1Q5R1I8 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-1Q5R1I8 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trav3-1Q5R1I8 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-1Q5R1I8 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-1Q5R1I8 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-1Q5R1I8 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-1Q5R1I8 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-1Q5R1I8 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-1Q5R1I8 Gm16425-201ENSMUST00000118143 3130 ntBASIC11.54□□□□□ -0.56
Trav3-1Q5R1I8 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav3-1Q5R1I8 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-1Q5R1I8 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-1Q5R1I8 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-1Q5R1I8 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav3-1Q5R1I8 Gm45364-201ENSMUST00000210883 159 ntBASIC11.54□□□□□ -0.56
Trav3-1Q5R1I8 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-1Q5R1I8 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-1Q5R1I8 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-1Q5R1I8 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-1Q5R1I8 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-1Q5R1I8 Gm11841-201ENSMUST00000117060 1963 ntBASIC11.54□□□□□ -0.56
Trav3-1Q5R1I8 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-1Q5R1I8 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-1Q5R1I8 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-1Q5R1I8 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-1Q5R1I8 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-1Q5R1I8 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-1Q5R1I8 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-1Q5R1I8 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-1Q5R1I8 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-1Q5R1I8 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-1Q5R1I8 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-1Q5R1I8 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-1Q5R1I8 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-1Q5R1I8 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-1Q5R1I8 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-1Q5R1I8 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-1Q5R1I8 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-1Q5R1I8 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC11.53□□□□□ -0.56
Trav3-1Q5R1I8 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-1Q5R1I8 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-1Q5R1I8 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trav3-1Q5R1I8 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-1Q5R1I8 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-1Q5R1I8 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC11.53□□□□□ -0.56
Trav3-1Q5R1I8 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-1Q5R1I8 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-1Q5R1I8 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-1Q5R1I8 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Trav3-1Q5R1I8 Gm45855-201ENSMUST00000212546 880 ntBASIC11.53□□□□□ -0.56
Trav3-1Q5R1I8 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-1Q5R1I8 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-1Q5R1I8 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-1Q5R1I8 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-1Q5R1I8 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-1Q5R1I8 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-1Q5R1I8 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms