Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Trav8d-1Q5R1H8 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav8d-1Q5R1H8 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav8d-1Q5R1H8 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trav8d-1Q5R1H8 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav8d-1Q5R1H8 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.94□□□□□ -0.18
Trav8d-1Q5R1H8 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav8d-1Q5R1H8 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav8d-1Q5R1H8 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav8d-1Q5R1H8 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav8d-1Q5R1H8 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.93□□□□□ -0.18
Trav8d-1Q5R1H8 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav8d-1Q5R1H8 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav8d-1Q5R1H8 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav8d-1Q5R1H8 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav8d-1Q5R1H8 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav8d-1Q5R1H8 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav8d-1Q5R1H8 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav8d-1Q5R1H8 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav8d-1Q5R1H8 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav8d-1Q5R1H8 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav8d-1Q5R1H8 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.93□□□□□ -0.18
Trav8d-1Q5R1H8 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav8d-1Q5R1H8 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav8d-1Q5R1H8 Spcs1-207ENSMUST00000228767 1008 ntBASIC13.93□□□□□ -0.18
Trav8d-1Q5R1H8 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav8d-1Q5R1H8 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trav8d-1Q5R1H8 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav8d-1Q5R1H8 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav8d-1Q5R1H8 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav8d-1Q5R1H8 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav8d-1Q5R1H8 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav8d-1Q5R1H8 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav8d-1Q5R1H8 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav8d-1Q5R1H8 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Trav8d-1Q5R1H8 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav8d-1Q5R1H8 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav8d-1Q5R1H8 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav8d-1Q5R1H8 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav8d-1Q5R1H8 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.92□□□□□ -0.18
Trav8d-1Q5R1H8 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav8d-1Q5R1H8 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav8d-1Q5R1H8 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav8d-1Q5R1H8 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav8d-1Q5R1H8 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav8d-1Q5R1H8 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trav8d-1Q5R1H8 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav8d-1Q5R1H8 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav8d-1Q5R1H8 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Trav8d-1Q5R1H8 Gm13148-201ENSMUST00000118892 745 ntBASIC13.92□□□□□ -0.18
Trav8d-1Q5R1H8 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav8d-1Q5R1H8 Gm5297-201ENSMUST00000198555 1171 ntBASIC13.92□□□□□ -0.18
Trav8d-1Q5R1H8 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav8d-1Q5R1H8 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trav8d-1Q5R1H8 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.92□□□□□ -0.18
Trav8d-1Q5R1H8 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav8d-1Q5R1H8 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trav8d-1Q5R1H8 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav8d-1Q5R1H8 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav8d-1Q5R1H8 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav8d-1Q5R1H8 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC13.92□□□□□ -0.18
Trav8d-1Q5R1H8 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav8d-1Q5R1H8 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav8d-1Q5R1H8 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav8d-1Q5R1H8 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav8d-1Q5R1H8 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trav8d-1Q5R1H8 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav8d-1Q5R1H8 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav8d-1Q5R1H8 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav8d-1Q5R1H8 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav8d-1Q5R1H8 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav8d-1Q5R1H8 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav8d-1Q5R1H8 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav8d-1Q5R1H8 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav8d-1Q5R1H8 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav8d-1Q5R1H8 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav8d-1Q5R1H8 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Trav8d-1Q5R1H8 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav8d-1Q5R1H8 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav8d-1Q5R1H8 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav8d-1Q5R1H8 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav8d-1Q5R1H8 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav8d-1Q5R1H8 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav8d-1Q5R1H8 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav8d-1Q5R1H8 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav8d-1Q5R1H8 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav8d-1Q5R1H8 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav8d-1Q5R1H8 Gm13216-201ENSMUST00000117145 591 ntBASIC13.91□□□□□ -0.18
Trav8d-1Q5R1H8 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC13.91□□□□□ -0.18
Trav8d-1Q5R1H8 Rab3c-203ENSMUST00000224180 967 ntBASIC13.91□□□□□ -0.18
Trav8d-1Q5R1H8 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav8d-1Q5R1H8 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav8d-1Q5R1H8 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav8d-1Q5R1H8 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav8d-1Q5R1H8 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.91□□□□□ -0.18
Trav8d-1Q5R1H8 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC13.91□□□□□ -0.18
Trav8d-1Q5R1H8 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC13.91□□□□□ -0.18
Trav8d-1Q5R1H8 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav8d-1Q5R1H8 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav8d-1Q5R1H8 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms