Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav8d-2Q5R1B6 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav8d-2Q5R1B6 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav8d-2Q5R1B6 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav8d-2Q5R1B6 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.51■□□□□ 0.23
Trav8d-2Q5R1B6 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav8d-2Q5R1B6 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav8d-2Q5R1B6 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.51■□□□□ 0.23
Trav8d-2Q5R1B6 Gm12350-201ENSMUST00000121208 462 ntBASIC16.51■□□□□ 0.23
Trav8d-2Q5R1B6 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav8d-2Q5R1B6 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.51■□□□□ 0.23
Trav8d-2Q5R1B6 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trav8d-2Q5R1B6 Gm44357-201ENSMUST00000195897 142 ntBASIC16.51■□□□□ 0.23
Trav8d-2Q5R1B6 Gm19658-201ENSMUST00000196231 138 ntBASIC16.51■□□□□ 0.23
Trav8d-2Q5R1B6 Gm44367-201ENSMUST00000196836 138 ntBASIC16.51■□□□□ 0.23
Trav8d-2Q5R1B6 Gm44350-201ENSMUST00000197197 138 ntBASIC16.51■□□□□ 0.23
Trav8d-2Q5R1B6 Gm44390-201ENSMUST00000197533 144 ntBASIC16.51■□□□□ 0.23
Trav8d-2Q5R1B6 Gm44313-201ENSMUST00000198018 138 ntBASIC16.51■□□□□ 0.23
Trav8d-2Q5R1B6 Gm44486-201ENSMUST00000198508 138 ntBASIC16.51■□□□□ 0.23
Trav8d-2Q5R1B6 Gm44314-201ENSMUST00000199263 138 ntBASIC16.51■□□□□ 0.23
Trav8d-2Q5R1B6 Gm44394-201ENSMUST00000199558 138 ntBASIC16.51■□□□□ 0.23
Trav8d-2Q5R1B6 Gm44484-201ENSMUST00000199873 138 ntBASIC16.51■□□□□ 0.23
Trav8d-2Q5R1B6 Gm44466-201ENSMUST00000200264 138 ntBASIC16.51■□□□□ 0.23
Trav8d-2Q5R1B6 Gm44359-201ENSMUST00000200671 138 ntBASIC16.51■□□□□ 0.23
Trav8d-2Q5R1B6 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav8d-2Q5R1B6 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav8d-2Q5R1B6 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Trav8d-2Q5R1B6 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav8d-2Q5R1B6 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav8d-2Q5R1B6 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav8d-2Q5R1B6 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Trav8d-2Q5R1B6 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav8d-2Q5R1B6 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav8d-2Q5R1B6 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav8d-2Q5R1B6 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav8d-2Q5R1B6 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav8d-2Q5R1B6 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav8d-2Q5R1B6 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav8d-2Q5R1B6 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav8d-2Q5R1B6 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav8d-2Q5R1B6 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.5■□□□□ 0.23
Trav8d-2Q5R1B6 Gm5364-201ENSMUST00000216789 889 ntBASIC16.5■□□□□ 0.23
Trav8d-2Q5R1B6 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.5■□□□□ 0.23
Trav8d-2Q5R1B6 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav8d-2Q5R1B6 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav8d-2Q5R1B6 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav8d-2Q5R1B6 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav8d-2Q5R1B6 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav8d-2Q5R1B6 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav8d-2Q5R1B6 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav8d-2Q5R1B6 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav8d-2Q5R1B6 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav8d-2Q5R1B6 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav8d-2Q5R1B6 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav8d-2Q5R1B6 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.49■□□□□ 0.23
Trav8d-2Q5R1B6 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.49■□□□□ 0.23
Trav8d-2Q5R1B6 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.49■□□□□ 0.23
Trav8d-2Q5R1B6 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav8d-2Q5R1B6 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav8d-2Q5R1B6 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav8d-2Q5R1B6 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav8d-2Q5R1B6 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Trav8d-2Q5R1B6 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav8d-2Q5R1B6 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav8d-2Q5R1B6 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav8d-2Q5R1B6 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav8d-2Q5R1B6 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav8d-2Q5R1B6 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.48■□□□□ 0.23
Trav8d-2Q5R1B6 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Trav8d-2Q5R1B6 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.48■□□□□ 0.23
Trav8d-2Q5R1B6 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav8d-2Q5R1B6 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav8d-2Q5R1B6 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Trav8d-2Q5R1B6 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav8d-2Q5R1B6 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav8d-2Q5R1B6 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav8d-2Q5R1B6 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.47■□□□□ 0.23
Trav8d-2Q5R1B6 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav8d-2Q5R1B6 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav8d-2Q5R1B6 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Trav8d-2Q5R1B6 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav8d-2Q5R1B6 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav8d-2Q5R1B6 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav8d-2Q5R1B6 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.47■□□□□ 0.23
Trav8d-2Q5R1B6 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.47■□□□□ 0.23
Trav8d-2Q5R1B6 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav8d-2Q5R1B6 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav8d-2Q5R1B6 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.47■□□□□ 0.23
Trav8d-2Q5R1B6 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Trav8d-2Q5R1B6 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.47■□□□□ 0.23
Trav8d-2Q5R1B6 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
Trav8d-2Q5R1B6 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav8d-2Q5R1B6 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav8d-2Q5R1B6 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav8d-2Q5R1B6 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.47■□□□□ 0.23
Trav8d-2Q5R1B6 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trav8d-2Q5R1B6 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.47■□□□□ 0.23
Trav8d-2Q5R1B6 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav8d-2Q5R1B6 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav8d-2Q5R1B6 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms