Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf43Q5NCP0 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Rnf43Q5NCP0 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf43Q5NCP0 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf43Q5NCP0 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf43Q5NCP0 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf43Q5NCP0 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf43Q5NCP0 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf43Q5NCP0 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Rnf43Q5NCP0 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rnf43Q5NCP0 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.23■□□□□ 0.35
Rnf43Q5NCP0 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf43Q5NCP0 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf43Q5NCP0 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rnf43Q5NCP0 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf43Q5NCP0 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf43Q5NCP0 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf43Q5NCP0 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf43Q5NCP0 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf43Q5NCP0 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Rnf43Q5NCP0 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rnf43Q5NCP0 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf43Q5NCP0 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf43Q5NCP0 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf43Q5NCP0 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.22■□□□□ 0.35
Rnf43Q5NCP0 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf43Q5NCP0 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf43Q5NCP0 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf43Q5NCP0 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.22■□□□□ 0.35
Rnf43Q5NCP0 Gm12895-201ENSMUST00000122214 226 ntBASIC17.22■□□□□ 0.35
Rnf43Q5NCP0 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf43Q5NCP0 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.22■□□□□ 0.35
Rnf43Q5NCP0 Mir8098-201ENSMUST00000184011 137 ntBASIC17.22■□□□□ 0.35
Rnf43Q5NCP0 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf43Q5NCP0 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.22■□□□□ 0.35
Rnf43Q5NCP0 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.22■□□□□ 0.35
Rnf43Q5NCP0 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf43Q5NCP0 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Rnf43Q5NCP0 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf43Q5NCP0 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Rnf43Q5NCP0 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf43Q5NCP0 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf43Q5NCP0 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf43Q5NCP0 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf43Q5NCP0 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf43Q5NCP0 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf43Q5NCP0 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf43Q5NCP0 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf43Q5NCP0 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Rnf43Q5NCP0 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Rnf43Q5NCP0 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Rnf43Q5NCP0 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
Rnf43Q5NCP0 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf43Q5NCP0 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf43Q5NCP0 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf43Q5NCP0 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.21■□□□□ 0.35
Rnf43Q5NCP0 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf43Q5NCP0 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf43Q5NCP0 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rnf43Q5NCP0 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Rnf43Q5NCP0 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf43Q5NCP0 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf43Q5NCP0 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf43Q5NCP0 Gm13884-201ENSMUST00000118103 829 ntBASIC17.2■□□□□ 0.34
Rnf43Q5NCP0 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf43Q5NCP0 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.2■□□□□ 0.34
Rnf43Q5NCP0 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf43Q5NCP0 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf43Q5NCP0 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf43Q5NCP0 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf43Q5NCP0 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf43Q5NCP0 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf43Q5NCP0 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf43Q5NCP0 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf43Q5NCP0 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf43Q5NCP0 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Rnf43Q5NCP0 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Rnf43Q5NCP0 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf43Q5NCP0 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf43Q5NCP0 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf43Q5NCP0 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf43Q5NCP0 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf43Q5NCP0 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf43Q5NCP0 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf43Q5NCP0 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf43Q5NCP0 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.18■□□□□ 0.34
Rnf43Q5NCP0 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Rnf43Q5NCP0 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Rnf43Q5NCP0 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf43Q5NCP0 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf43Q5NCP0 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Rnf43Q5NCP0 Gm11336-201ENSMUST00000118168 334 ntBASIC17.18■□□□□ 0.34
Rnf43Q5NCP0 Gm15372-201ENSMUST00000120729 834 ntBASIC17.18■□□□□ 0.34
Rnf43Q5NCP0 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf43Q5NCP0 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf43Q5NCP0 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf43Q5NCP0 Gm43347-201ENSMUST00000200226 580 ntBASIC17.18■□□□□ 0.34
Rnf43Q5NCP0 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.18■□□□□ 0.34
Rnf43Q5NCP0 Gm5864-201ENSMUST00000202263 970 ntBASIC17.18■□□□□ 0.34
Rnf43Q5NCP0 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms