Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Scn2bQ56A07 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.8■□□□□ 0.28
Scn2bQ56A07 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Scn2bQ56A07 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn2bQ56A07 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn2bQ56A07 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.8■□□□□ 0.28
Scn2bQ56A07 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.8■□□□□ 0.28
Scn2bQ56A07 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Scn2bQ56A07 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Scn2bQ56A07 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.8■□□□□ 0.28
Scn2bQ56A07 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn2bQ56A07 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn2bQ56A07 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Scn2bQ56A07 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn2bQ56A07 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.8■□□□□ 0.28
Scn2bQ56A07 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Scn2bQ56A07 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn2bQ56A07 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn2bQ56A07 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Scn2bQ56A07 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn2bQ56A07 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Scn2bQ56A07 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn2bQ56A07 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn2bQ56A07 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn2bQ56A07 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn2bQ56A07 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Scn2bQ56A07 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Scn2bQ56A07 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn2bQ56A07 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn2bQ56A07 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn2bQ56A07 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn2bQ56A07 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Scn2bQ56A07 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Scn2bQ56A07 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn2bQ56A07 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Scn2bQ56A07 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Scn2bQ56A07 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn2bQ56A07 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn2bQ56A07 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn2bQ56A07 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn2bQ56A07 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn2bQ56A07 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn2bQ56A07 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.78■□□□□ 0.28
Scn2bQ56A07 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn2bQ56A07 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Scn2bQ56A07 Gm42545-201ENSMUST00000202755 922 ntBASIC16.78■□□□□ 0.28
Scn2bQ56A07 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Scn2bQ56A07 Gm18025-201ENSMUST00000221733 862 ntBASIC16.78■□□□□ 0.28
Scn2bQ56A07 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn2bQ56A07 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Scn2bQ56A07 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn2bQ56A07 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn2bQ56A07 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Scn2bQ56A07 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn2bQ56A07 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn2bQ56A07 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.78■□□□□ 0.28
Scn2bQ56A07 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn2bQ56A07 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn2bQ56A07 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Scn2bQ56A07 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Scn2bQ56A07 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Scn2bQ56A07 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.77■□□□□ 0.28
Scn2bQ56A07 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
Scn2bQ56A07 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn2bQ56A07 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn2bQ56A07 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn2bQ56A07 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Scn2bQ56A07 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
Scn2bQ56A07 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scn2bQ56A07 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Scn2bQ56A07 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scn2bQ56A07 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scn2bQ56A07 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Scn2bQ56A07 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn2bQ56A07 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Scn2bQ56A07 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scn2bQ56A07 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scn2bQ56A07 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn2bQ56A07 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn2bQ56A07 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Scn2bQ56A07 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn2bQ56A07 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.76■□□□□ 0.27
Scn2bQ56A07 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.76■□□□□ 0.27
Scn2bQ56A07 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.76■□□□□ 0.27
Scn2bQ56A07 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.76■□□□□ 0.27
Scn2bQ56A07 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn2bQ56A07 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn2bQ56A07 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scn2bQ56A07 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn2bQ56A07 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn2bQ56A07 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scn2bQ56A07 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn2bQ56A07 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn2bQ56A07 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scn2bQ56A07 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn2bQ56A07 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn2bQ56A07 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn2bQ56A07 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.75■□□□□ 0.27
Scn2bQ56A07 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn2bQ56A07 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms