Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rc3h1Q4VGL6 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.59■□□□□ 0.73
Rc3h1Q4VGL6 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rc3h1Q4VGL6 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rc3h1Q4VGL6 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rc3h1Q4VGL6 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rc3h1Q4VGL6 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rc3h1Q4VGL6 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rc3h1Q4VGL6 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rc3h1Q4VGL6 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rc3h1Q4VGL6 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rc3h1Q4VGL6 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rc3h1Q4VGL6 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rc3h1Q4VGL6 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rc3h1Q4VGL6 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Rc3h1Q4VGL6 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rc3h1Q4VGL6 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rc3h1Q4VGL6 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
Rc3h1Q4VGL6 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Rc3h1Q4VGL6 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Rc3h1Q4VGL6 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
Rc3h1Q4VGL6 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC19.58■□□□□ 0.72
Rc3h1Q4VGL6 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rc3h1Q4VGL6 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rc3h1Q4VGL6 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rc3h1Q4VGL6 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rc3h1Q4VGL6 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rc3h1Q4VGL6 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.57■□□□□ 0.72
Rc3h1Q4VGL6 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Rc3h1Q4VGL6 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rc3h1Q4VGL6 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rc3h1Q4VGL6 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rc3h1Q4VGL6 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rc3h1Q4VGL6 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rc3h1Q4VGL6 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.57■□□□□ 0.72
Rc3h1Q4VGL6 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rc3h1Q4VGL6 Gm9103-201ENSMUST00000119371 405 ntBASIC19.57■□□□□ 0.72
Rc3h1Q4VGL6 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rc3h1Q4VGL6 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.57■□□□□ 0.72
Rc3h1Q4VGL6 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.57■□□□□ 0.72
Rc3h1Q4VGL6 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rc3h1Q4VGL6 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rc3h1Q4VGL6 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rc3h1Q4VGL6 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rc3h1Q4VGL6 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rc3h1Q4VGL6 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rc3h1Q4VGL6 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rc3h1Q4VGL6 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19.57■□□□□ 0.72
Rc3h1Q4VGL6 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Rc3h1Q4VGL6 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rc3h1Q4VGL6 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rc3h1Q4VGL6 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rc3h1Q4VGL6 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rc3h1Q4VGL6 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rc3h1Q4VGL6 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rc3h1Q4VGL6 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC19.56■□□□□ 0.72
Rc3h1Q4VGL6 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.56■□□□□ 0.72
Rc3h1Q4VGL6 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rc3h1Q4VGL6 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rc3h1Q4VGL6 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rc3h1Q4VGL6 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Rc3h1Q4VGL6 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.56■□□□□ 0.72
Rc3h1Q4VGL6 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rc3h1Q4VGL6 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rc3h1Q4VGL6 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Rc3h1Q4VGL6 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC19.55■□□□□ 0.72
Rc3h1Q4VGL6 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rc3h1Q4VGL6 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rc3h1Q4VGL6 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rc3h1Q4VGL6 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rc3h1Q4VGL6 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rc3h1Q4VGL6 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rc3h1Q4VGL6 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rc3h1Q4VGL6 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rc3h1Q4VGL6 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rc3h1Q4VGL6 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rc3h1Q4VGL6 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rc3h1Q4VGL6 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rc3h1Q4VGL6 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rc3h1Q4VGL6 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rc3h1Q4VGL6 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rc3h1Q4VGL6 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rc3h1Q4VGL6 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rc3h1Q4VGL6 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.53■□□□□ 0.72
Rc3h1Q4VGL6 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rc3h1Q4VGL6 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rc3h1Q4VGL6 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rc3h1Q4VGL6 Zkscan4-202ENSMUST00000225845 1506 ntBASIC19.53■□□□□ 0.72
Rc3h1Q4VGL6 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC19.53■□□□□ 0.72
Rc3h1Q4VGL6 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rc3h1Q4VGL6 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rc3h1Q4VGL6 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rc3h1Q4VGL6 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rc3h1Q4VGL6 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Rc3h1Q4VGL6 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rc3h1Q4VGL6 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.53■□□□□ 0.72
Rc3h1Q4VGL6 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Rc3h1Q4VGL6 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rc3h1Q4VGL6 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.53■□□□□ 0.72
Rc3h1Q4VGL6 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms