Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Pds5bQ4VA53 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC29.54■■■□□ 2.32
Pds5bQ4VA53 Gm11764-201ENSMUST00000120221 623 ntBASIC29.54■■■□□ 2.32
Pds5bQ4VA53 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
Pds5bQ4VA53 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Pds5bQ4VA53 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Pds5bQ4VA53 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC29.53■■■□□ 2.32
Pds5bQ4VA53 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC29.53■■■□□ 2.32
Pds5bQ4VA53 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC29.53■■■□□ 2.32
Pds5bQ4VA53 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Pds5bQ4VA53 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
Pds5bQ4VA53 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC29.52■■■□□ 2.32
Pds5bQ4VA53 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Pds5bQ4VA53 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
Pds5bQ4VA53 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
Pds5bQ4VA53 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC29.52■■■□□ 2.32
Pds5bQ4VA53 AA543401-201ENSMUST00000164248 1269 ntBASIC29.52■■■□□ 2.32
Pds5bQ4VA53 AC114585.2-202ENSMUST00000228094 426 ntBASIC29.52■■■□□ 2.32
Pds5bQ4VA53 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Pds5bQ4VA53 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC29.51■■■□□ 2.32
Pds5bQ4VA53 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
Pds5bQ4VA53 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC29.51■■■□□ 2.31
Pds5bQ4VA53 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Pds5bQ4VA53 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
Pds5bQ4VA53 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC29.51■■■□□ 2.31
Pds5bQ4VA53 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC29.51■■■□□ 2.31
Pds5bQ4VA53 AC139382.1-201ENSMUST00000221402 498 ntBASIC29.51■■■□□ 2.31
Pds5bQ4VA53 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Pds5bQ4VA53 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC29.51■■■□□ 2.31
Pds5bQ4VA53 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Pds5bQ4VA53 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Pds5bQ4VA53 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Pds5bQ4VA53 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Pds5bQ4VA53 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Pds5bQ4VA53 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Pds5bQ4VA53 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC29.5■■■□□ 2.31
Pds5bQ4VA53 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC29.5■■■□□ 2.31
Pds5bQ4VA53 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Pds5bQ4VA53 Gm15442-201ENSMUST00000117905 1527 ntBASIC29.5■■■□□ 2.31
Pds5bQ4VA53 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC29.5■■■□□ 2.31
Pds5bQ4VA53 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Pds5bQ4VA53 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC29.49■■■□□ 2.31
Pds5bQ4VA53 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Pds5bQ4VA53 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
Pds5bQ4VA53 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC29.49■■■□□ 2.31
Pds5bQ4VA53 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Pds5bQ4VA53 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC29.48■■■□□ 2.31
Pds5bQ4VA53 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Pds5bQ4VA53 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Pds5bQ4VA53 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC29.48■■■□□ 2.31
Pds5bQ4VA53 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC29.48■■■□□ 2.31
Pds5bQ4VA53 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC29.48■■■□□ 2.31
Pds5bQ4VA53 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC29.48■■■□□ 2.31
Pds5bQ4VA53 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC29.48■■■□□ 2.31
Pds5bQ4VA53 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Pds5bQ4VA53 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Pds5bQ4VA53 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Pds5bQ4VA53 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Pds5bQ4VA53 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
Pds5bQ4VA53 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Pds5bQ4VA53 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC29.47■■■□□ 2.31
Pds5bQ4VA53 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC29.47■■■□□ 2.31
Pds5bQ4VA53 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC29.47■■■□□ 2.31
Pds5bQ4VA53 Gm5784-201ENSMUST00000179344 2478 ntBASIC29.47■■■□□ 2.31
Pds5bQ4VA53 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Pds5bQ4VA53 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Pds5bQ4VA53 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
Pds5bQ4VA53 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC29.46■■■□□ 2.31
Pds5bQ4VA53 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
Pds5bQ4VA53 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Pds5bQ4VA53 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Pds5bQ4VA53 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC29.46■■■□□ 2.31
Pds5bQ4VA53 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC29.46■■■□□ 2.31
Pds5bQ4VA53 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC29.46■■■□□ 2.31
Pds5bQ4VA53 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC29.45■■■□□ 2.31
Pds5bQ4VA53 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC29.45■■■□□ 2.31
Pds5bQ4VA53 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC29.45■■■□□ 2.31
Pds5bQ4VA53 Gm8655-201ENSMUST00000221159 852 ntBASIC29.45■■■□□ 2.31
Pds5bQ4VA53 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC29.45■■■□□ 2.31
Pds5bQ4VA53 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC29.45■■■□□ 2.31
Pds5bQ4VA53 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Pds5bQ4VA53 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
Pds5bQ4VA53 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC29.45■■■□□ 2.3
Pds5bQ4VA53 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
Pds5bQ4VA53 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Pds5bQ4VA53 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Pds5bQ4VA53 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC29.45■■■□□ 2.3
Pds5bQ4VA53 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Pds5bQ4VA53 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC29.44■■■□□ 2.3
Pds5bQ4VA53 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Pds5bQ4VA53 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC29.44■■■□□ 2.3
Pds5bQ4VA53 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Pds5bQ4VA53 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Pds5bQ4VA53 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC29.44■■■□□ 2.3
Pds5bQ4VA53 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Pds5bQ4VA53 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC29.44■■■□□ 2.3
Pds5bQ4VA53 AC159295.1-201ENSMUST00000225326 940 ntBASIC29.44■■■□□ 2.3
Pds5bQ4VA53 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC29.44■■■□□ 2.3
Pds5bQ4VA53 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC29.43■■■□□ 2.3
Pds5bQ4VA53 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC29.43■■■□□ 2.3
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms