Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ckap2Q3V1H1 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ckap2Q3V1H1 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Ckap2Q3V1H1 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.44■□□□□ 0.7
Ckap2Q3V1H1 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Ckap2Q3V1H1 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.44■□□□□ 0.7
Ckap2Q3V1H1 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ckap2Q3V1H1 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ckap2Q3V1H1 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ckap2Q3V1H1 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ckap2Q3V1H1 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ckap2Q3V1H1 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ckap2Q3V1H1 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ckap2Q3V1H1 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ckap2Q3V1H1 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Ckap2Q3V1H1 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Ckap2Q3V1H1 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ckap2Q3V1H1 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ckap2Q3V1H1 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ckap2Q3V1H1 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ckap2Q3V1H1 Gm13216-201ENSMUST00000117145 591 ntBASIC19.43■□□□□ 0.7
Ckap2Q3V1H1 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.43■□□□□ 0.7
Ckap2Q3V1H1 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ckap2Q3V1H1 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ckap2Q3V1H1 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ckap2Q3V1H1 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.43■□□□□ 0.7
Ckap2Q3V1H1 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ckap2Q3V1H1 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Ckap2Q3V1H1 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ckap2Q3V1H1 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ckap2Q3V1H1 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ckap2Q3V1H1 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Ckap2Q3V1H1 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ckap2Q3V1H1 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ckap2Q3V1H1 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.42■□□□□ 0.7
Ckap2Q3V1H1 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ckap2Q3V1H1 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ckap2Q3V1H1 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ckap2Q3V1H1 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ckap2Q3V1H1 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ckap2Q3V1H1 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ckap2Q3V1H1 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ckap2Q3V1H1 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ckap2Q3V1H1 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ckap2Q3V1H1 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ckap2Q3V1H1 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ckap2Q3V1H1 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ckap2Q3V1H1 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ckap2Q3V1H1 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ckap2Q3V1H1 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ckap2Q3V1H1 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ckap2Q3V1H1 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.41■□□□□ 0.7
Ckap2Q3V1H1 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ckap2Q3V1H1 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ckap2Q3V1H1 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.41■□□□□ 0.7
Ckap2Q3V1H1 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.41■□□□□ 0.7
Ckap2Q3V1H1 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ckap2Q3V1H1 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ckap2Q3V1H1 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Ckap2Q3V1H1 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Ckap2Q3V1H1 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ckap2Q3V1H1 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ckap2Q3V1H1 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ckap2Q3V1H1 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ckap2Q3V1H1 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ckap2Q3V1H1 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Ckap2Q3V1H1 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Ckap2Q3V1H1 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.4■□□□□ 0.7
Ckap2Q3V1H1 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ckap2Q3V1H1 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Ckap2Q3V1H1 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.4■□□□□ 0.7
Ckap2Q3V1H1 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ckap2Q3V1H1 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ckap2Q3V1H1 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ckap2Q3V1H1 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC19.4■□□□□ 0.7
Ckap2Q3V1H1 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.4■□□□□ 0.7
Ckap2Q3V1H1 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.4■□□□□ 0.7
Ckap2Q3V1H1 Gm9987-201ENSMUST00000069768 567 ntBASIC19.4■□□□□ 0.7
Ckap2Q3V1H1 Gm10566-201ENSMUST00000086739 996 ntBASIC19.4■□□□□ 0.7
Ckap2Q3V1H1 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Ckap2Q3V1H1 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ckap2Q3V1H1 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Ckap2Q3V1H1 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ckap2Q3V1H1 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ckap2Q3V1H1 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ckap2Q3V1H1 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Ckap2Q3V1H1 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ckap2Q3V1H1 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ckap2Q3V1H1 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Ckap2Q3V1H1 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ckap2Q3V1H1 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Ckap2Q3V1H1 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.39■□□□□ 0.69
Ckap2Q3V1H1 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ckap2Q3V1H1 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ckap2Q3V1H1 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ckap2Q3V1H1 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.39■□□□□ 0.69
Ckap2Q3V1H1 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.39■□□□□ 0.69
Ckap2Q3V1H1 Gm18032-201ENSMUST00000222541 538 ntBASIC19.39■□□□□ 0.69
Ckap2Q3V1H1 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ckap2Q3V1H1 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms