Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.95■□□□□ 0.94
Usp48Q3V0C5 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp48Q3V0C5 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.95■□□□□ 0.94
Usp48Q3V0C5 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.94■□□□□ 0.94
Usp48Q3V0C5 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp48Q3V0C5 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Usp48Q3V0C5 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp48Q3V0C5 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp48Q3V0C5 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp48Q3V0C5 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC20.94■□□□□ 0.94
Usp48Q3V0C5 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp48Q3V0C5 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp48Q3V0C5 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Usp48Q3V0C5 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp48Q3V0C5 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Usp48Q3V0C5 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp48Q3V0C5 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Usp48Q3V0C5 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp48Q3V0C5 Mir770-201ENSMUST00000103252 94 ntBASIC20.93■□□□□ 0.94
Usp48Q3V0C5 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Usp48Q3V0C5 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp48Q3V0C5 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp48Q3V0C5 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp48Q3V0C5 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC20.93■□□□□ 0.94
Usp48Q3V0C5 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Usp48Q3V0C5 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.93■□□□□ 0.94
Usp48Q3V0C5 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp48Q3V0C5 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp48Q3V0C5 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp48Q3V0C5 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
Usp48Q3V0C5 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC20.92■□□□□ 0.94
Usp48Q3V0C5 Gm3272-201ENSMUST00000181181 1229 ntBASIC20.92■□□□□ 0.94
Usp48Q3V0C5 Gm45328-201ENSMUST00000210942 917 ntBASIC20.92■□□□□ 0.94
Usp48Q3V0C5 Gm10566-201ENSMUST00000086739 996 ntBASIC20.92■□□□□ 0.94
Usp48Q3V0C5 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp48Q3V0C5 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp48Q3V0C5 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
Usp48Q3V0C5 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp48Q3V0C5 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp48Q3V0C5 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.92■□□□□ 0.94
Usp48Q3V0C5 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Usp48Q3V0C5 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp48Q3V0C5 Olfr129-201ENSMUST00000122318 993 ntBASIC20.91■□□□□ 0.94
Usp48Q3V0C5 Gm11860-201ENSMUST00000122346 1010 ntBASIC20.91■□□□□ 0.94
Usp48Q3V0C5 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.91■□□□□ 0.94
Usp48Q3V0C5 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp48Q3V0C5 Mir8098-201ENSMUST00000184011 137 ntBASIC20.91■□□□□ 0.94
Usp48Q3V0C5 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.91■□□□□ 0.94
Usp48Q3V0C5 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Usp48Q3V0C5 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp48Q3V0C5 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC20.91■□□□□ 0.94
Usp48Q3V0C5 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Usp48Q3V0C5 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Usp48Q3V0C5 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp48Q3V0C5 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp48Q3V0C5 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp48Q3V0C5 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp48Q3V0C5 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp48Q3V0C5 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp48Q3V0C5 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp48Q3V0C5 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Usp48Q3V0C5 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Usp48Q3V0C5 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp48Q3V0C5 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp48Q3V0C5 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.9■□□□□ 0.94
Usp48Q3V0C5 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp48Q3V0C5 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp48Q3V0C5 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp48Q3V0C5 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp48Q3V0C5 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp48Q3V0C5 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Usp48Q3V0C5 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp48Q3V0C5 Il3ra-202ENSMUST00000223589 738 ntBASIC20.9■□□□□ 0.94
Usp48Q3V0C5 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp48Q3V0C5 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp48Q3V0C5 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Usp48Q3V0C5 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Usp48Q3V0C5 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.9■□□□□ 0.94
Usp48Q3V0C5 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp48Q3V0C5 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp48Q3V0C5 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Usp48Q3V0C5 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp48Q3V0C5 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Usp48Q3V0C5 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Usp48Q3V0C5 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Usp48Q3V0C5 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Usp48Q3V0C5 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Usp48Q3V0C5 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Usp48Q3V0C5 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Usp48Q3V0C5 Gm13884-201ENSMUST00000118103 829 ntBASIC20.89■□□□□ 0.93
Usp48Q3V0C5 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Usp48Q3V0C5 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Usp48Q3V0C5 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Usp48Q3V0C5 Gm9731-201ENSMUST00000209480 747 ntBASIC20.89■□□□□ 0.93
Usp48Q3V0C5 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp48Q3V0C5 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Usp48Q3V0C5 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp48Q3V0C5 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC20.89■□□□□ 0.93
Usp48Q3V0C5 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp48Q3V0C5 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms