Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cks1brtQ3UNC9 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cks1brtQ3UNC9 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Cks1brtQ3UNC9 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cks1brtQ3UNC9 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cks1brtQ3UNC9 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cks1brtQ3UNC9 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC12.3□□□□□ -0.44
Cks1brtQ3UNC9 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cks1brtQ3UNC9 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cks1brtQ3UNC9 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cks1brtQ3UNC9 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cks1brtQ3UNC9 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cks1brtQ3UNC9 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cks1brtQ3UNC9 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cks1brtQ3UNC9 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Cks1brtQ3UNC9 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cks1brtQ3UNC9 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cks1brtQ3UNC9 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cks1brtQ3UNC9 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cks1brtQ3UNC9 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cks1brtQ3UNC9 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Cks1brtQ3UNC9 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cks1brtQ3UNC9 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Cks1brtQ3UNC9 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cks1brtQ3UNC9 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cks1brtQ3UNC9 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC12.29□□□□□ -0.44
Cks1brtQ3UNC9 Gm19094-201ENSMUST00000209791 1246 ntBASIC12.29□□□□□ -0.44
Cks1brtQ3UNC9 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cks1brtQ3UNC9 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cks1brtQ3UNC9 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cks1brtQ3UNC9 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cks1brtQ3UNC9 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cks1brtQ3UNC9 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cks1brtQ3UNC9 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cks1brtQ3UNC9 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cks1brtQ3UNC9 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC12.29□□□□□ -0.44
Cks1brtQ3UNC9 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Cks1brtQ3UNC9 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cks1brtQ3UNC9 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cks1brtQ3UNC9 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cks1brtQ3UNC9 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cks1brtQ3UNC9 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Cks1brtQ3UNC9 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cks1brtQ3UNC9 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cks1brtQ3UNC9 Gm10167-201ENSMUST00000150411 1479 ntBASIC12.28□□□□□ -0.44
Cks1brtQ3UNC9 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cks1brtQ3UNC9 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cks1brtQ3UNC9 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cks1brtQ3UNC9 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC12.28□□□□□ -0.44
Cks1brtQ3UNC9 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cks1brtQ3UNC9 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Cks1brtQ3UNC9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cks1brtQ3UNC9 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC12.28□□□□□ -0.44
Cks1brtQ3UNC9 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cks1brtQ3UNC9 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cks1brtQ3UNC9 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Cks1brtQ3UNC9 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cks1brtQ3UNC9 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cks1brtQ3UNC9 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cks1brtQ3UNC9 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cks1brtQ3UNC9 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cks1brtQ3UNC9 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cks1brtQ3UNC9 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cks1brtQ3UNC9 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Cks1brtQ3UNC9 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cks1brtQ3UNC9 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Cks1brtQ3UNC9 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cks1brtQ3UNC9 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cks1brtQ3UNC9 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cks1brtQ3UNC9 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cks1brtQ3UNC9 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cks1brtQ3UNC9 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cks1brtQ3UNC9 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cks1brtQ3UNC9 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cks1brtQ3UNC9 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC12.27□□□□□ -0.45
Cks1brtQ3UNC9 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cks1brtQ3UNC9 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cks1brtQ3UNC9 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cks1brtQ3UNC9 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cks1brtQ3UNC9 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cks1brtQ3UNC9 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Cks1brtQ3UNC9 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cks1brtQ3UNC9 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Cks1brtQ3UNC9 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cks1brtQ3UNC9 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cks1brtQ3UNC9 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.27□□□□□ -0.45
Cks1brtQ3UNC9 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cks1brtQ3UNC9 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cks1brtQ3UNC9 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cks1brtQ3UNC9 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cks1brtQ3UNC9 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cks1brtQ3UNC9 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Cks1brtQ3UNC9 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cks1brtQ3UNC9 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cks1brtQ3UNC9 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC12.26□□□□□ -0.45
Cks1brtQ3UNC9 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cks1brtQ3UNC9 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cks1brtQ3UNC9 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cks1brtQ3UNC9 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Cks1brtQ3UNC9 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms