Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Naf1Q3UMQ8 Gm29518-201ENSMUST00000190858 372 ntBASIC17.24■□□□□ 0.35
Naf1Q3UMQ8 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Naf1Q3UMQ8 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Naf1Q3UMQ8 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Naf1Q3UMQ8 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Naf1Q3UMQ8 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Naf1Q3UMQ8 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Naf1Q3UMQ8 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Naf1Q3UMQ8 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Naf1Q3UMQ8 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Naf1Q3UMQ8 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.24■□□□□ 0.35
Naf1Q3UMQ8 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Naf1Q3UMQ8 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Naf1Q3UMQ8 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Naf1Q3UMQ8 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Naf1Q3UMQ8 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Naf1Q3UMQ8 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Naf1Q3UMQ8 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Naf1Q3UMQ8 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Naf1Q3UMQ8 Gm11355-201ENSMUST00000121120 306 ntBASIC17.23■□□□□ 0.35
Naf1Q3UMQ8 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.23■□□□□ 0.35
Naf1Q3UMQ8 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Naf1Q3UMQ8 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Naf1Q3UMQ8 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Naf1Q3UMQ8 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Naf1Q3UMQ8 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Naf1Q3UMQ8 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Naf1Q3UMQ8 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Naf1Q3UMQ8 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Naf1Q3UMQ8 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Naf1Q3UMQ8 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Naf1Q3UMQ8 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.23■□□□□ 0.35
Naf1Q3UMQ8 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Naf1Q3UMQ8 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Naf1Q3UMQ8 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Naf1Q3UMQ8 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.22■□□□□ 0.35
Naf1Q3UMQ8 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Naf1Q3UMQ8 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Naf1Q3UMQ8 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Naf1Q3UMQ8 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Naf1Q3UMQ8 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Naf1Q3UMQ8 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Naf1Q3UMQ8 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Naf1Q3UMQ8 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Naf1Q3UMQ8 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Naf1Q3UMQ8 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Naf1Q3UMQ8 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Naf1Q3UMQ8 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Naf1Q3UMQ8 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Naf1Q3UMQ8 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Naf1Q3UMQ8 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Naf1Q3UMQ8 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Naf1Q3UMQ8 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Naf1Q3UMQ8 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Naf1Q3UMQ8 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Naf1Q3UMQ8 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Naf1Q3UMQ8 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Naf1Q3UMQ8 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Naf1Q3UMQ8 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Naf1Q3UMQ8 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Naf1Q3UMQ8 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Naf1Q3UMQ8 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Naf1Q3UMQ8 Gm7284-201ENSMUST00000131667 944 ntBASIC17.21■□□□□ 0.35
Naf1Q3UMQ8 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Naf1Q3UMQ8 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Naf1Q3UMQ8 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Naf1Q3UMQ8 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Naf1Q3UMQ8 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Naf1Q3UMQ8 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Naf1Q3UMQ8 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Naf1Q3UMQ8 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Naf1Q3UMQ8 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Naf1Q3UMQ8 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.21■□□□□ 0.35
Naf1Q3UMQ8 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Naf1Q3UMQ8 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Naf1Q3UMQ8 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Naf1Q3UMQ8 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
Naf1Q3UMQ8 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Naf1Q3UMQ8 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Naf1Q3UMQ8 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Naf1Q3UMQ8 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Naf1Q3UMQ8 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Naf1Q3UMQ8 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Naf1Q3UMQ8 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Naf1Q3UMQ8 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Naf1Q3UMQ8 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Naf1Q3UMQ8 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Naf1Q3UMQ8 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Naf1Q3UMQ8 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Naf1Q3UMQ8 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Naf1Q3UMQ8 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.2■□□□□ 0.34
Naf1Q3UMQ8 Ank2-226ENSMUST00000189368 339 ntBASIC17.2■□□□□ 0.34
Naf1Q3UMQ8 Gm37722-201ENSMUST00000193757 208 ntBASIC17.2■□□□□ 0.34
Naf1Q3UMQ8 Gm17808-201ENSMUST00000200859 894 ntBASIC17.2■□□□□ 0.34
Naf1Q3UMQ8 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Naf1Q3UMQ8 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Naf1Q3UMQ8 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Naf1Q3UMQ8 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Naf1Q3UMQ8 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms