Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smcr8Q3UMB5 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smcr8Q3UMB5 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smcr8Q3UMB5 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Smcr8Q3UMB5 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smcr8Q3UMB5 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smcr8Q3UMB5 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smcr8Q3UMB5 Gm11355-201ENSMUST00000121120 306 ntBASIC18.22■□□□□ 0.51
Smcr8Q3UMB5 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Smcr8Q3UMB5 Gm26039-201ENSMUST00000158152 144 ntBASIC18.22■□□□□ 0.51
Smcr8Q3UMB5 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Smcr8Q3UMB5 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smcr8Q3UMB5 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.22■□□□□ 0.51
Smcr8Q3UMB5 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smcr8Q3UMB5 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smcr8Q3UMB5 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smcr8Q3UMB5 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smcr8Q3UMB5 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smcr8Q3UMB5 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smcr8Q3UMB5 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Smcr8Q3UMB5 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smcr8Q3UMB5 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smcr8Q3UMB5 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smcr8Q3UMB5 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Smcr8Q3UMB5 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.21■□□□□ 0.51
Smcr8Q3UMB5 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smcr8Q3UMB5 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smcr8Q3UMB5 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Smcr8Q3UMB5 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Smcr8Q3UMB5 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Smcr8Q3UMB5 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Smcr8Q3UMB5 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smcr8Q3UMB5 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.21■□□□□ 0.51
Smcr8Q3UMB5 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Smcr8Q3UMB5 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Smcr8Q3UMB5 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.21■□□□□ 0.5
Smcr8Q3UMB5 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Smcr8Q3UMB5 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smcr8Q3UMB5 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.2■□□□□ 0.5
Smcr8Q3UMB5 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smcr8Q3UMB5 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smcr8Q3UMB5 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smcr8Q3UMB5 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smcr8Q3UMB5 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smcr8Q3UMB5 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Smcr8Q3UMB5 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smcr8Q3UMB5 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.2■□□□□ 0.5
Smcr8Q3UMB5 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.2■□□□□ 0.5
Smcr8Q3UMB5 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Smcr8Q3UMB5 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Smcr8Q3UMB5 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Smcr8Q3UMB5 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smcr8Q3UMB5 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smcr8Q3UMB5 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Smcr8Q3UMB5 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Smcr8Q3UMB5 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Smcr8Q3UMB5 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Smcr8Q3UMB5 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smcr8Q3UMB5 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smcr8Q3UMB5 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.2■□□□□ 0.5
Smcr8Q3UMB5 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smcr8Q3UMB5 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smcr8Q3UMB5 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smcr8Q3UMB5 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.19■□□□□ 0.5
Smcr8Q3UMB5 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smcr8Q3UMB5 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Smcr8Q3UMB5 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smcr8Q3UMB5 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Smcr8Q3UMB5 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smcr8Q3UMB5 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Smcr8Q3UMB5 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smcr8Q3UMB5 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smcr8Q3UMB5 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Smcr8Q3UMB5 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.19■□□□□ 0.5
Smcr8Q3UMB5 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smcr8Q3UMB5 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smcr8Q3UMB5 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Smcr8Q3UMB5 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.18■□□□□ 0.5
Smcr8Q3UMB5 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smcr8Q3UMB5 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smcr8Q3UMB5 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smcr8Q3UMB5 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smcr8Q3UMB5 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smcr8Q3UMB5 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.18■□□□□ 0.5
Smcr8Q3UMB5 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smcr8Q3UMB5 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smcr8Q3UMB5 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smcr8Q3UMB5 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smcr8Q3UMB5 Ank2-226ENSMUST00000189368 339 ntBASIC18.18■□□□□ 0.5
Smcr8Q3UMB5 Gm29518-201ENSMUST00000190858 372 ntBASIC18.18■□□□□ 0.5
Smcr8Q3UMB5 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Smcr8Q3UMB5 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smcr8Q3UMB5 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smcr8Q3UMB5 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smcr8Q3UMB5 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Smcr8Q3UMB5 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smcr8Q3UMB5 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smcr8Q3UMB5 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smcr8Q3UMB5 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smcr8Q3UMB5 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms