Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Limch1Q3UH68 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Limch1Q3UH68 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Limch1Q3UH68 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Limch1Q3UH68 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Limch1Q3UH68 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Limch1Q3UH68 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Limch1Q3UH68 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Limch1Q3UH68 Gm21362-201ENSMUST00000194272 928 ntBASIC19.97■□□□□ 0.79
Limch1Q3UH68 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Limch1Q3UH68 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Limch1Q3UH68 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Limch1Q3UH68 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Limch1Q3UH68 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Limch1Q3UH68 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Limch1Q3UH68 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Limch1Q3UH68 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Limch1Q3UH68 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.97■□□□□ 0.79
Limch1Q3UH68 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Limch1Q3UH68 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Limch1Q3UH68 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Limch1Q3UH68 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Limch1Q3UH68 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Limch1Q3UH68 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Limch1Q3UH68 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Limch1Q3UH68 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Limch1Q3UH68 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.96■□□□□ 0.79
Limch1Q3UH68 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Limch1Q3UH68 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Limch1Q3UH68 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Limch1Q3UH68 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Limch1Q3UH68 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.79
Limch1Q3UH68 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
Limch1Q3UH68 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Limch1Q3UH68 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.95■□□□□ 0.78
Limch1Q3UH68 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Limch1Q3UH68 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.95■□□□□ 0.78
Limch1Q3UH68 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Limch1Q3UH68 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.95■□□□□ 0.78
Limch1Q3UH68 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Limch1Q3UH68 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Limch1Q3UH68 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.95■□□□□ 0.78
Limch1Q3UH68 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Limch1Q3UH68 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Limch1Q3UH68 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Limch1Q3UH68 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Limch1Q3UH68 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Limch1Q3UH68 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Limch1Q3UH68 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Limch1Q3UH68 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Limch1Q3UH68 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Limch1Q3UH68 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Limch1Q3UH68 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Limch1Q3UH68 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Limch1Q3UH68 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Limch1Q3UH68 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Limch1Q3UH68 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.94■□□□□ 0.78
Limch1Q3UH68 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
Limch1Q3UH68 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Limch1Q3UH68 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Limch1Q3UH68 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Limch1Q3UH68 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Limch1Q3UH68 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Limch1Q3UH68 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Limch1Q3UH68 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Limch1Q3UH68 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Limch1Q3UH68 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.93■□□□□ 0.78
Limch1Q3UH68 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Limch1Q3UH68 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.93■□□□□ 0.78
Limch1Q3UH68 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
Limch1Q3UH68 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Limch1Q3UH68 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Limch1Q3UH68 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
Limch1Q3UH68 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Limch1Q3UH68 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Limch1Q3UH68 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.92■□□□□ 0.78
Limch1Q3UH68 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Limch1Q3UH68 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.92■□□□□ 0.78
Limch1Q3UH68 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Limch1Q3UH68 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Limch1Q3UH68 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Limch1Q3UH68 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Limch1Q3UH68 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Limch1Q3UH68 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.92■□□□□ 0.78
Limch1Q3UH68 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Limch1Q3UH68 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Limch1Q3UH68 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Limch1Q3UH68 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Limch1Q3UH68 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Limch1Q3UH68 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Limch1Q3UH68 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Limch1Q3UH68 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Limch1Q3UH68 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Limch1Q3UH68 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Limch1Q3UH68 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Limch1Q3UH68 Gm18959-201ENSMUST00000208954 655 ntBASIC19.91■□□□□ 0.78
Limch1Q3UH68 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Limch1Q3UH68 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Limch1Q3UH68 Gm10819-201ENSMUST00000099988 561 ntBASIC19.91■□□□□ 0.78
Limch1Q3UH68 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms