Protein–RNA interactions for Protein: Q3U4B1

Ssbp4, Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4Q3U4B1 Gm17808-201ENSMUST00000200859 894 ntBASIC14.26□□□□□ -0.13
Ssbp4Q3U4B1 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Ssbp4Q3U4B1 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ssbp4Q3U4B1 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ssbp4Q3U4B1 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ssbp4Q3U4B1 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ssbp4Q3U4B1 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ssbp4Q3U4B1 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ssbp4Q3U4B1 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ssbp4Q3U4B1 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ssbp4Q3U4B1 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ssbp4Q3U4B1 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ssbp4Q3U4B1 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Ssbp4Q3U4B1 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ssbp4Q3U4B1 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ssbp4Q3U4B1 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ssbp4Q3U4B1 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ssbp4Q3U4B1 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ssbp4Q3U4B1 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ssbp4Q3U4B1 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ssbp4Q3U4B1 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ssbp4Q3U4B1 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ssbp4Q3U4B1 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ssbp4Q3U4B1 Gm27000-201ENSMUST00000182943 842 ntBASIC14.25□□□□□ -0.13
Ssbp4Q3U4B1 Gm37722-201ENSMUST00000193757 208 ntBASIC14.25□□□□□ -0.13
Ssbp4Q3U4B1 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Ssbp4Q3U4B1 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Ssbp4Q3U4B1 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ssbp4Q3U4B1 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ssbp4Q3U4B1 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Ssbp4Q3U4B1 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ssbp4Q3U4B1 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ssbp4Q3U4B1 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ssbp4Q3U4B1 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ssbp4Q3U4B1 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ssbp4Q3U4B1 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ssbp4Q3U4B1 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssbp4Q3U4B1 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssbp4Q3U4B1 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssbp4Q3U4B1 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14.24□□□□□ -0.13
Ssbp4Q3U4B1 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssbp4Q3U4B1 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssbp4Q3U4B1 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssbp4Q3U4B1 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssbp4Q3U4B1 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssbp4Q3U4B1 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ssbp4Q3U4B1 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssbp4Q3U4B1 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssbp4Q3U4B1 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ssbp4Q3U4B1 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssbp4Q3U4B1 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.24□□□□□ -0.13
Ssbp4Q3U4B1 Gm11950-201ENSMUST00000121615 838 ntBASIC14.24□□□□□ -0.13
Ssbp4Q3U4B1 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssbp4Q3U4B1 Gm6623-201ENSMUST00000173570 544 ntBASIC14.24□□□□□ -0.13
Ssbp4Q3U4B1 Gm27704-201ENSMUST00000185094 107 ntBASIC14.24□□□□□ -0.13
Ssbp4Q3U4B1 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ssbp4Q3U4B1 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ssbp4Q3U4B1 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Ssbp4Q3U4B1 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssbp4Q3U4B1 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssbp4Q3U4B1 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssbp4Q3U4B1 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Ssbp4Q3U4B1 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC14.24□□□□□ -0.13
Ssbp4Q3U4B1 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssbp4Q3U4B1 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ssbp4Q3U4B1 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssbp4Q3U4B1 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ssbp4Q3U4B1 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ssbp4Q3U4B1 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ssbp4Q3U4B1 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ssbp4Q3U4B1 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.23□□□□□ -0.13
Ssbp4Q3U4B1 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ssbp4Q3U4B1 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Ssbp4Q3U4B1 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ssbp4Q3U4B1 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ssbp4Q3U4B1 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.23□□□□□ -0.13
Ssbp4Q3U4B1 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.23□□□□□ -0.13
Ssbp4Q3U4B1 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.23□□□□□ -0.13
Ssbp4Q3U4B1 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.23□□□□□ -0.13
Ssbp4Q3U4B1 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ssbp4Q3U4B1 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ssbp4Q3U4B1 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ssbp4Q3U4B1 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ssbp4Q3U4B1 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ssbp4Q3U4B1 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ssbp4Q3U4B1 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ssbp4Q3U4B1 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ssbp4Q3U4B1 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Ssbp4Q3U4B1 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ssbp4Q3U4B1 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.23□□□□□ -0.13
Ssbp4Q3U4B1 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ssbp4Q3U4B1 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.23□□□□□ -0.13
Ssbp4Q3U4B1 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ssbp4Q3U4B1 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ssbp4Q3U4B1 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ssbp4Q3U4B1 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ssbp4Q3U4B1 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.23□□□□□ -0.13
Ssbp4Q3U4B1 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ssbp4Q3U4B1 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ssbp4Q3U4B1 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms