Protein–RNA interactions for Protein: Q2VWQ2

Nell1, Protein kinase C-binding protein NELL1, mousemouse

Predictions only

Length 810 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nell1Q2VWQ2 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nell1Q2VWQ2 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nell1Q2VWQ2 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nell1Q2VWQ2 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nell1Q2VWQ2 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.59■□□□□ 0.25
Nell1Q2VWQ2 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.59■□□□□ 0.25
Nell1Q2VWQ2 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nell1Q2VWQ2 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nell1Q2VWQ2 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Nell1Q2VWQ2 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nell1Q2VWQ2 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nell1Q2VWQ2 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nell1Q2VWQ2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nell1Q2VWQ2 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nell1Q2VWQ2 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nell1Q2VWQ2 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nell1Q2VWQ2 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nell1Q2VWQ2 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nell1Q2VWQ2 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nell1Q2VWQ2 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nell1Q2VWQ2 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.58■□□□□ 0.25
Nell1Q2VWQ2 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Nell1Q2VWQ2 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Nell1Q2VWQ2 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nell1Q2VWQ2 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nell1Q2VWQ2 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nell1Q2VWQ2 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nell1Q2VWQ2 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nell1Q2VWQ2 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nell1Q2VWQ2 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
Nell1Q2VWQ2 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nell1Q2VWQ2 Gm26039-201ENSMUST00000158152 144 ntBASIC16.58■□□□□ 0.24
Nell1Q2VWQ2 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
Nell1Q2VWQ2 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
Nell1Q2VWQ2 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
Nell1Q2VWQ2 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.58■□□□□ 0.24
Nell1Q2VWQ2 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Nell1Q2VWQ2 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.58■□□□□ 0.24
Nell1Q2VWQ2 Birc2-201ENSMUST00000054878 378 ntBASIC16.58■□□□□ 0.24
Nell1Q2VWQ2 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.58■□□□□ 0.24
Nell1Q2VWQ2 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nell1Q2VWQ2 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
Nell1Q2VWQ2 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nell1Q2VWQ2 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nell1Q2VWQ2 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nell1Q2VWQ2 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Nell1Q2VWQ2 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nell1Q2VWQ2 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nell1Q2VWQ2 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nell1Q2VWQ2 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nell1Q2VWQ2 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nell1Q2VWQ2 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nell1Q2VWQ2 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Nell1Q2VWQ2 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.57■□□□□ 0.24
Nell1Q2VWQ2 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.57■□□□□ 0.24
Nell1Q2VWQ2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.57■□□□□ 0.24
Nell1Q2VWQ2 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nell1Q2VWQ2 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nell1Q2VWQ2 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nell1Q2VWQ2 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nell1Q2VWQ2 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nell1Q2VWQ2 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.57■□□□□ 0.24
Nell1Q2VWQ2 Gm37025-201ENSMUST00000195159 829 ntBASIC16.57■□□□□ 0.24
Nell1Q2VWQ2 Gm29791-202ENSMUST00000207888 369 ntBASIC16.57■□□□□ 0.24
Nell1Q2VWQ2 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nell1Q2VWQ2 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nell1Q2VWQ2 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Nell1Q2VWQ2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nell1Q2VWQ2 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nell1Q2VWQ2 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nell1Q2VWQ2 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nell1Q2VWQ2 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nell1Q2VWQ2 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Nell1Q2VWQ2 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Nell1Q2VWQ2 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nell1Q2VWQ2 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nell1Q2VWQ2 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nell1Q2VWQ2 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nell1Q2VWQ2 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nell1Q2VWQ2 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nell1Q2VWQ2 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Nell1Q2VWQ2 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nell1Q2VWQ2 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.56■□□□□ 0.24
Nell1Q2VWQ2 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.56■□□□□ 0.24
Nell1Q2VWQ2 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.56■□□□□ 0.24
Nell1Q2VWQ2 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.56■□□□□ 0.24
Nell1Q2VWQ2 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Nell1Q2VWQ2 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Nell1Q2VWQ2 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nell1Q2VWQ2 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Nell1Q2VWQ2 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nell1Q2VWQ2 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nell1Q2VWQ2 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nell1Q2VWQ2 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nell1Q2VWQ2 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nell1Q2VWQ2 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nell1Q2VWQ2 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nell1Q2VWQ2 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nell1Q2VWQ2 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nell1Q2VWQ2 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms