Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ush2AQ2QI47 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Ush2AQ2QI47 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC9.06□□□□□ -0.96
Ush2AQ2QI47 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC9.06□□□□□ -0.96
Ush2AQ2QI47 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC9.06□□□□□ -0.96
Ush2AQ2QI47 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Ush2AQ2QI47 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ush2AQ2QI47 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ush2AQ2QI47 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ush2AQ2QI47 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Ush2AQ2QI47 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Ush2AQ2QI47 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC9.05□□□□□ -0.96
Ush2AQ2QI47 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Ush2AQ2QI47 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC9.05□□□□□ -0.96
Ush2AQ2QI47 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC9.05□□□□□ -0.96
Ush2AQ2QI47 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ush2AQ2QI47 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ush2AQ2QI47 Gm12504-201ENSMUST00000120860 2231 ntBASIC9.05□□□□□ -0.96
Ush2AQ2QI47 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ush2AQ2QI47 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ush2AQ2QI47 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC9.05□□□□□ -0.96
Ush2AQ2QI47 Gm18827-201ENSMUST00000188341 790 ntBASIC9.05□□□□□ -0.96
Ush2AQ2QI47 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC9.05□□□□□ -0.96
Ush2AQ2QI47 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ush2AQ2QI47 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ush2AQ2QI47 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ush2AQ2QI47 Golph3-205ENSMUST00000228671 2842 ntBASIC9.05□□□□□ -0.96
Ush2AQ2QI47 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ush2AQ2QI47 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Ush2AQ2QI47 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ush2AQ2QI47 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC9.05□□□□□ -0.96
Ush2AQ2QI47 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ush2AQ2QI47 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Ush2AQ2QI47 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Ush2AQ2QI47 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC9.05□□□□□ -0.96
Ush2AQ2QI47 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC9.05□□□□□ -0.96
Ush2AQ2QI47 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC9.05□□□□□ -0.96
Ush2AQ2QI47 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Ush2AQ2QI47 Gm17271-201ENSMUST00000165535 355 ntBASIC9.05□□□□□ -0.96
Ush2AQ2QI47 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
Ush2AQ2QI47 Gm4899-201ENSMUST00000178708 719 ntBASIC9.05□□□□□ -0.96
Ush2AQ2QI47 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC9.05□□□□□ -0.96
Ush2AQ2QI47 Gm18062-201ENSMUST00000208020 547 ntBASIC9.05□□□□□ -0.96
Ush2AQ2QI47 Gm18055-201ENSMUST00000208254 547 ntBASIC9.05□□□□□ -0.96
Ush2AQ2QI47 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ush2AQ2QI47 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC9.05□□□□□ -0.96
Ush2AQ2QI47 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Ush2AQ2QI47 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ush2AQ2QI47 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ush2AQ2QI47 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Ush2AQ2QI47 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Ush2AQ2QI47 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ush2AQ2QI47 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ush2AQ2QI47 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ush2AQ2QI47 Gm12490-201ENSMUST00000120255 560 ntBASIC9.04□□□□□ -0.96
Ush2AQ2QI47 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ush2AQ2QI47 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Ush2AQ2QI47 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Ush2AQ2QI47 Gm45612-201ENSMUST00000211320 160 ntBASIC9.04□□□□□ -0.96
Ush2AQ2QI47 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC9.04□□□□□ -0.96
Ush2AQ2QI47 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC9.04□□□□□ -0.96
Ush2AQ2QI47 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ush2AQ2QI47 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ush2AQ2QI47 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ush2AQ2QI47 Gm14928-201ENSMUST00000120198 477 ntBASIC9.04□□□□□ -0.96
Ush2AQ2QI47 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ush2AQ2QI47 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC9.04□□□□□ -0.96
Ush2AQ2QI47 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ush2AQ2QI47 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ush2AQ2QI47 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ush2AQ2QI47 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ush2AQ2QI47 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ush2AQ2QI47 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ush2AQ2QI47 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Ush2AQ2QI47 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC9.04□□□□□ -0.96
Ush2AQ2QI47 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC9.04□□□□□ -0.96
Ush2AQ2QI47 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Ush2AQ2QI47 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ush2AQ2QI47 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Ush2AQ2QI47 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ush2AQ2QI47 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ush2AQ2QI47 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ush2AQ2QI47 Gm11745-201ENSMUST00000121669 448 ntBASIC9.03□□□□□ -0.96
Ush2AQ2QI47 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ush2AQ2QI47 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC9.03□□□□□ -0.96
Ush2AQ2QI47 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ush2AQ2QI47 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC9.03□□□□□ -0.96
Ush2AQ2QI47 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Ush2AQ2QI47 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC9.03□□□□□ -0.96
Ush2AQ2QI47 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ush2AQ2QI47 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Ush2AQ2QI47 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Ush2AQ2QI47 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ush2AQ2QI47 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ush2AQ2QI47 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC9.03□□□□□ -0.96
Ush2AQ2QI47 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC9.03□□□□□ -0.96
Ush2AQ2QI47 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Ush2AQ2QI47 Gm45331-201ENSMUST00000209868 554 ntBASIC9.03□□□□□ -0.96
Ush2AQ2QI47 AC149294.4-201ENSMUST00000227870 882 ntBASIC9.03□□□□□ -0.96
Ush2AQ2QI47 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms