Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pkd1l3Q2EG98 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Pkd1l3Q2EG98 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pkd1l3Q2EG98 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pkd1l3Q2EG98 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pkd1l3Q2EG98 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pkd1l3Q2EG98 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Pkd1l3Q2EG98 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pkd1l3Q2EG98 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Pkd1l3Q2EG98 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.18■□□□□ 0.02
Pkd1l3Q2EG98 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pkd1l3Q2EG98 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.18■□□□□ 0.02
Pkd1l3Q2EG98 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Pkd1l3Q2EG98 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.18■□□□□ 0.02
Pkd1l3Q2EG98 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pkd1l3Q2EG98 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pkd1l3Q2EG98 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pkd1l3Q2EG98 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pkd1l3Q2EG98 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pkd1l3Q2EG98 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pkd1l3Q2EG98 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pkd1l3Q2EG98 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pkd1l3Q2EG98 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pkd1l3Q2EG98 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pkd1l3Q2EG98 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC15.17■□□□□ 0.02
Pkd1l3Q2EG98 Mir770-201ENSMUST00000103252 94 ntBASIC15.17■□□□□ 0.02
Pkd1l3Q2EG98 Gm11950-201ENSMUST00000121615 838 ntBASIC15.17■□□□□ 0.02
Pkd1l3Q2EG98 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pkd1l3Q2EG98 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.17■□□□□ 0.02
Pkd1l3Q2EG98 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.17■□□□□ 0.02
Pkd1l3Q2EG98 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pkd1l3Q2EG98 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pkd1l3Q2EG98 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pkd1l3Q2EG98 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pkd1l3Q2EG98 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pkd1l3Q2EG98 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pkd1l3Q2EG98 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.17■□□□□ 0.02
Pkd1l3Q2EG98 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pkd1l3Q2EG98 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Pkd1l3Q2EG98 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.17■□□□□ 0.02
Pkd1l3Q2EG98 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pkd1l3Q2EG98 Gm27000-201ENSMUST00000182943 842 ntBASIC15.17■□□□□ 0.02
Pkd1l3Q2EG98 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.17■□□□□ 0.02
Pkd1l3Q2EG98 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pkd1l3Q2EG98 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pkd1l3Q2EG98 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Pkd1l3Q2EG98 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pkd1l3Q2EG98 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pkd1l3Q2EG98 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pkd1l3Q2EG98 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pkd1l3Q2EG98 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pkd1l3Q2EG98 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pkd1l3Q2EG98 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pkd1l3Q2EG98 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pkd1l3Q2EG98 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pkd1l3Q2EG98 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pkd1l3Q2EG98 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.16■□□□□ 0.02
Pkd1l3Q2EG98 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.16■□□□□ 0.02
Pkd1l3Q2EG98 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pkd1l3Q2EG98 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pkd1l3Q2EG98 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pkd1l3Q2EG98 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Pkd1l3Q2EG98 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pkd1l3Q2EG98 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pkd1l3Q2EG98 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pkd1l3Q2EG98 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pkd1l3Q2EG98 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pkd1l3Q2EG98 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pkd1l3Q2EG98 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.16■□□□□ 0.02
Pkd1l3Q2EG98 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pkd1l3Q2EG98 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pkd1l3Q2EG98 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.16■□□□□ 0.02
Pkd1l3Q2EG98 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pkd1l3Q2EG98 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pkd1l3Q2EG98 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pkd1l3Q2EG98 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pkd1l3Q2EG98 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pkd1l3Q2EG98 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Pkd1l3Q2EG98 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Pkd1l3Q2EG98 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pkd1l3Q2EG98 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pkd1l3Q2EG98 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pkd1l3Q2EG98 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.15■□□□□ 0.02
Pkd1l3Q2EG98 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pkd1l3Q2EG98 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pkd1l3Q2EG98 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Pkd1l3Q2EG98 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pkd1l3Q2EG98 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pkd1l3Q2EG98 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pkd1l3Q2EG98 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pkd1l3Q2EG98 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pkd1l3Q2EG98 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pkd1l3Q2EG98 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pkd1l3Q2EG98 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pkd1l3Q2EG98 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pkd1l3Q2EG98 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pkd1l3Q2EG98 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Pkd1l3Q2EG98 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pkd1l3Q2EG98 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pkd1l3Q2EG98 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms