Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.14■□□□□ 0.33
Ebf1Q07802 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ebf1Q07802 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ebf1Q07802 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ebf1Q07802 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ebf1Q07802 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ebf1Q07802 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ebf1Q07802 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ebf1Q07802 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.14■□□□□ 0.33
Ebf1Q07802 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.14■□□□□ 0.33
Ebf1Q07802 Mir3081-201ENSMUST00000175305 84 ntBASIC17.14■□□□□ 0.33
Ebf1Q07802 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ebf1Q07802 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Ebf1Q07802 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ebf1Q07802 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ebf1Q07802 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ebf1Q07802 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.14■□□□□ 0.33
Ebf1Q07802 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ebf1Q07802 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ebf1Q07802 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ebf1Q07802 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Ebf1Q07802 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ebf1Q07802 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ebf1Q07802 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Ebf1Q07802 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.13■□□□□ 0.33
Ebf1Q07802 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ebf1Q07802 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ebf1Q07802 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ebf1Q07802 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.13■□□□□ 0.33
Ebf1Q07802 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.13■□□□□ 0.33
Ebf1Q07802 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.13■□□□□ 0.33
Ebf1Q07802 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.13■□□□□ 0.33
Ebf1Q07802 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ebf1Q07802 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ebf1Q07802 Gm10566-201ENSMUST00000086739 996 ntBASIC17.13■□□□□ 0.33
Ebf1Q07802 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ebf1Q07802 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ebf1Q07802 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ebf1Q07802 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ebf1Q07802 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ebf1Q07802 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ebf1Q07802 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Ebf1Q07802 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ebf1Q07802 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ebf1Q07802 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ebf1Q07802 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ebf1Q07802 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ebf1Q07802 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.12■□□□□ 0.33
Ebf1Q07802 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ebf1Q07802 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ebf1Q07802 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ebf1Q07802 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ebf1Q07802 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Ebf1Q07802 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.12■□□□□ 0.33
Ebf1Q07802 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.12■□□□□ 0.33
Ebf1Q07802 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.12■□□□□ 0.33
Ebf1Q07802 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.12■□□□□ 0.33
Ebf1Q07802 Gm27742-201ENSMUST00000184667 60 ntBASIC17.12■□□□□ 0.33
Ebf1Q07802 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.12■□□□□ 0.33
Ebf1Q07802 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ebf1Q07802 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ebf1Q07802 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ebf1Q07802 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ebf1Q07802 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ebf1Q07802 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ebf1Q07802 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ebf1Q07802 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ebf1Q07802 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Ebf1Q07802 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Ebf1Q07802 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ebf1Q07802 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ebf1Q07802 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.11■□□□□ 0.33
Ebf1Q07802 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ebf1Q07802 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ebf1Q07802 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ebf1Q07802 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ebf1Q07802 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ebf1Q07802 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.11■□□□□ 0.33
Ebf1Q07802 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Ebf1Q07802 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ebf1Q07802 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ebf1Q07802 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ebf1Q07802 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ebf1Q07802 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ebf1Q07802 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ebf1Q07802 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.1■□□□□ 0.33
Ebf1Q07802 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ebf1Q07802 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.1■□□□□ 0.33
Ebf1Q07802 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ebf1Q07802 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.1■□□□□ 0.33
Ebf1Q07802 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ebf1Q07802 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ebf1Q07802 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ebf1Q07802 Actl10-202ENSMUST00000226583 1501 ntBASIC17.1■□□□□ 0.33
Ebf1Q07802 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ebf1Q07802 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ebf1Q07802 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ebf1Q07802 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ebf1Q07802 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ebf1Q07802 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms