Protein–RNA interactions for Protein: Q02085

Snai1, Zinc finger protein SNAI1, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snai1Q02085 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Snai1Q02085 Gm44430-201ENSMUST00000203376 995 ntBASIC20.67■□□□□ 0.9
Snai1Q02085 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Snai1Q02085 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
Snai1Q02085 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Snai1Q02085 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Snai1Q02085 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Snai1Q02085 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Snai1Q02085 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Snai1Q02085 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snai1Q02085 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snai1Q02085 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snai1Q02085 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snai1Q02085 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC20.66■□□□□ 0.9
Snai1Q02085 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snai1Q02085 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Snai1Q02085 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC20.66■□□□□ 0.9
Snai1Q02085 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC20.66■□□□□ 0.9
Snai1Q02085 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Snai1Q02085 Gm13830-205ENSMUST00000201195 1155 ntBASIC20.66■□□□□ 0.9
Snai1Q02085 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Snai1Q02085 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snai1Q02085 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Snai1Q02085 AL590614.2-201ENSMUST00000225374 1937 ntBASIC20.66■□□□□ 0.9
Snai1Q02085 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Snai1Q02085 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snai1Q02085 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snai1Q02085 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snai1Q02085 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Snai1Q02085 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snai1Q02085 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snai1Q02085 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Snai1Q02085 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Snai1Q02085 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Snai1Q02085 Gfra2-202ENSMUST00000227633 1480 ntBASIC20.65■□□□□ 0.9
Snai1Q02085 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Snai1Q02085 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Snai1Q02085 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC20.65■□□□□ 0.9
Snai1Q02085 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.65■□□□□ 0.9
Snai1Q02085 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Snai1Q02085 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Snai1Q02085 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Snai1Q02085 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Snai1Q02085 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Snai1Q02085 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Snai1Q02085 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Snai1Q02085 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Snai1Q02085 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Snai1Q02085 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Snai1Q02085 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Snai1Q02085 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Snai1Q02085 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Snai1Q02085 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC20.64■□□□□ 0.89
Snai1Q02085 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC20.64■□□□□ 0.89
Snai1Q02085 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Snai1Q02085 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC20.64■□□□□ 0.89
Snai1Q02085 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC20.64■□□□□ 0.89
Snai1Q02085 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Snai1Q02085 Vti1a-206ENSMUST00000225529 1244 ntBASIC20.64■□□□□ 0.89
Snai1Q02085 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Snai1Q02085 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Snai1Q02085 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC20.64■□□□□ 0.89
Snai1Q02085 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Snai1Q02085 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Snai1Q02085 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Snai1Q02085 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Snai1Q02085 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Snai1Q02085 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snai1Q02085 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snai1Q02085 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snai1Q02085 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snai1Q02085 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Snai1Q02085 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Snai1Q02085 Gm1401-201ENSMUST00000122048 772 ntBASIC20.63■□□□□ 0.89
Snai1Q02085 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snai1Q02085 Gm25925-201ENSMUST00000158314 306 ntBASIC20.63■□□□□ 0.89
Snai1Q02085 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snai1Q02085 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Snai1Q02085 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snai1Q02085 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.62■□□□□ 0.89
Snai1Q02085 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snai1Q02085 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snai1Q02085 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snai1Q02085 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.62■□□□□ 0.89
Snai1Q02085 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Snai1Q02085 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snai1Q02085 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Snai1Q02085 Mir5131-201ENSMUST00000175426 93 ntBASIC20.62■□□□□ 0.89
Snai1Q02085 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC20.62■□□□□ 0.89
Snai1Q02085 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC20.62■□□□□ 0.89
Snai1Q02085 AC138767.1-201ENSMUST00000222661 415 ntBASIC20.62■□□□□ 0.89
Snai1Q02085 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Snai1Q02085 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Snai1Q02085 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snai1Q02085 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snai1Q02085 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snai1Q02085 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snai1Q02085 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snai1Q02085 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snai1Q02085 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms