Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
GabpaQ00422 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GabpaQ00422 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
GabpaQ00422 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
GabpaQ00422 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
GabpaQ00422 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GabpaQ00422 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GabpaQ00422 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC19.27■□□□□ 0.68
GabpaQ00422 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
GabpaQ00422 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GabpaQ00422 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
GabpaQ00422 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GabpaQ00422 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
GabpaQ00422 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
GabpaQ00422 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
GabpaQ00422 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
GabpaQ00422 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
GabpaQ00422 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.27■□□□□ 0.67
GabpaQ00422 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.26■□□□□ 0.67
GabpaQ00422 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
GabpaQ00422 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GabpaQ00422 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.26■□□□□ 0.67
GabpaQ00422 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
GabpaQ00422 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GabpaQ00422 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
GabpaQ00422 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GabpaQ00422 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.26■□□□□ 0.67
GabpaQ00422 Gm8969-201ENSMUST00000199694 526 ntBASIC19.26■□□□□ 0.67
GabpaQ00422 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
GabpaQ00422 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GabpaQ00422 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GabpaQ00422 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
GabpaQ00422 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GabpaQ00422 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GabpaQ00422 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.26■□□□□ 0.67
GabpaQ00422 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.26■□□□□ 0.67
GabpaQ00422 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
GabpaQ00422 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
GabpaQ00422 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
GabpaQ00422 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
GabpaQ00422 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GabpaQ00422 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.25■□□□□ 0.67
GabpaQ00422 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
GabpaQ00422 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.25■□□□□ 0.67
GabpaQ00422 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GabpaQ00422 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
GabpaQ00422 Gm18115-201ENSMUST00000221209 621 ntBASIC19.25■□□□□ 0.67
GabpaQ00422 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GabpaQ00422 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GabpaQ00422 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
GabpaQ00422 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
GabpaQ00422 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
GabpaQ00422 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GabpaQ00422 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GabpaQ00422 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.25■□□□□ 0.67
GabpaQ00422 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GabpaQ00422 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
GabpaQ00422 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
GabpaQ00422 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GabpaQ00422 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GabpaQ00422 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GabpaQ00422 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
GabpaQ00422 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GabpaQ00422 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
GabpaQ00422 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GabpaQ00422 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.24■□□□□ 0.67
GabpaQ00422 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GabpaQ00422 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC19.24■□□□□ 0.67
GabpaQ00422 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.24■□□□□ 0.67
GabpaQ00422 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
GabpaQ00422 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GabpaQ00422 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC19.24■□□□□ 0.67
GabpaQ00422 Zkscan4-202ENSMUST00000225845 1506 ntBASIC19.24■□□□□ 0.67
GabpaQ00422 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
GabpaQ00422 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
GabpaQ00422 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
GabpaQ00422 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GabpaQ00422 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GabpaQ00422 Gm6190-201ENSMUST00000220683 1374 ntBASIC19.23■□□□□ 0.67
GabpaQ00422 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GabpaQ00422 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GabpaQ00422 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GabpaQ00422 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
GabpaQ00422 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GabpaQ00422 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GabpaQ00422 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GabpaQ00422 Gm44450-201ENSMUST00000199528 114 ntBASIC19.23■□□□□ 0.67
GabpaQ00422 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
GabpaQ00422 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GabpaQ00422 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GabpaQ00422 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GabpaQ00422 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
GabpaQ00422 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.23■□□□□ 0.67
GabpaQ00422 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
GabpaQ00422 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GabpaQ00422 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GabpaQ00422 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GabpaQ00422 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GabpaQ00422 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GabpaQ00422 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms