Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.01■□□□□ 0.15
Nkx3-2P97503 Gm23634-201ENSMUST00000175071 91 ntBASIC16.01■□□□□ 0.15
Nkx3-2P97503 Gm22697-201ENSMUST00000175194 63 ntBASIC16.01■□□□□ 0.15
Nkx3-2P97503 Mir1668-201ENSMUST00000184114 107 ntBASIC16.01■□□□□ 0.15
Nkx3-2P97503 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Nkx3-2P97503 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx3-2P97503 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx3-2P97503 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Nkx3-2P97503 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx3-2P97503 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx3-2P97503 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx3-2P97503 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx3-2P97503 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Nkx3-2P97503 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx3-2P97503 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx3-2P97503 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx3-2P97503 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16■□□□□ 0.15
Nkx3-2P97503 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16■□□□□ 0.15
Nkx3-2P97503 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16■□□□□ 0.15
Nkx3-2P97503 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16■□□□□ 0.15
Nkx3-2P97503 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16■□□□□ 0.15
Nkx3-2P97503 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16■□□□□ 0.15
Nkx3-2P97503 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16■□□□□ 0.15
Nkx3-2P97503 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
Nkx3-2P97503 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Nkx3-2P97503 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16■□□□□ 0.15
Nkx3-2P97503 Gm7370-201ENSMUST00000219471 767 ntBASIC16■□□□□ 0.15
Nkx3-2P97503 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx3-2P97503 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx3-2P97503 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx3-2P97503 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx3-2P97503 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16■□□□□ 0.15
Nkx3-2P97503 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx3-2P97503 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx3-2P97503 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx3-2P97503 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx3-2P97503 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx3-2P97503 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx3-2P97503 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16■□□□□ 0.15
Nkx3-2P97503 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx3-2P97503 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx3-2P97503 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx3-2P97503 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx3-2P97503 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx3-2P97503 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.99■□□□□ 0.15
Nkx3-2P97503 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx3-2P97503 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx3-2P97503 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx3-2P97503 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx3-2P97503 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Nkx3-2P97503 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx3-2P97503 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.99■□□□□ 0.15
Nkx3-2P97503 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Nkx3-2P97503 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx3-2P97503 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx3-2P97503 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.99■□□□□ 0.15
Nkx3-2P97503 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx3-2P97503 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.99■□□□□ 0.15
Nkx3-2P97503 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.99■□□□□ 0.15
Nkx3-2P97503 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx3-2P97503 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx3-2P97503 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx3-2P97503 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx3-2P97503 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx3-2P97503 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx3-2P97503 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx3-2P97503 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx3-2P97503 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx3-2P97503 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.98■□□□□ 0.15
Nkx3-2P97503 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx3-2P97503 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx3-2P97503 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Nkx3-2P97503 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx3-2P97503 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Nkx3-2P97503 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Nkx3-2P97503 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.98■□□□□ 0.15
Nkx3-2P97503 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.98■□□□□ 0.15
Nkx3-2P97503 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.98■□□□□ 0.15
Nkx3-2P97503 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Nkx3-2P97503 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx3-2P97503 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx3-2P97503 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx3-2P97503 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx3-2P97503 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.98■□□□□ 0.15
Nkx3-2P97503 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx3-2P97503 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Nkx3-2P97503 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx3-2P97503 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx3-2P97503 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.97■□□□□ 0.15
Nkx3-2P97503 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx3-2P97503 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.97■□□□□ 0.15
Nkx3-2P97503 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx3-2P97503 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx3-2P97503 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx3-2P97503 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx3-2P97503 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Nkx3-2P97503 AA414768-201ENSMUST00000121924 1257 ntBASIC15.97■□□□□ 0.15
Nkx3-2P97503 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Nkx3-2P97503 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx3-2P97503 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms