Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim43bP86448 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim43bP86448 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.43■□□□□ 0.38
Trim43bP86448 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim43bP86448 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim43bP86448 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim43bP86448 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim43bP86448 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.43■□□□□ 0.38
Trim43bP86448 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim43bP86448 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Trim43bP86448 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim43bP86448 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim43bP86448 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim43bP86448 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim43bP86448 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Trim43bP86448 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim43bP86448 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim43bP86448 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.42■□□□□ 0.38
Trim43bP86448 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim43bP86448 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim43bP86448 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim43bP86448 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim43bP86448 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim43bP86448 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim43bP86448 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim43bP86448 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim43bP86448 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim43bP86448 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim43bP86448 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim43bP86448 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.41■□□□□ 0.38
Trim43bP86448 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim43bP86448 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim43bP86448 Gm15375-201ENSMUST00000119510 849 ntBASIC17.41■□□□□ 0.38
Trim43bP86448 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim43bP86448 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Trim43bP86448 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Trim43bP86448 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim43bP86448 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim43bP86448 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim43bP86448 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim43bP86448 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim43bP86448 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim43bP86448 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.41■□□□□ 0.38
Trim43bP86448 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim43bP86448 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim43bP86448 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim43bP86448 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim43bP86448 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim43bP86448 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.4■□□□□ 0.38
Trim43bP86448 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim43bP86448 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim43bP86448 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim43bP86448 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.4■□□□□ 0.38
Trim43bP86448 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.4■□□□□ 0.38
Trim43bP86448 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim43bP86448 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim43bP86448 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim43bP86448 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.4■□□□□ 0.38
Trim43bP86448 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim43bP86448 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trim43bP86448 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.39■□□□□ 0.37
Trim43bP86448 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim43bP86448 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Trim43bP86448 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Trim43bP86448 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim43bP86448 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trim43bP86448 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim43bP86448 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim43bP86448 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Trim43bP86448 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trim43bP86448 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.39■□□□□ 0.37
Trim43bP86448 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim43bP86448 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Trim43bP86448 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.39■□□□□ 0.37
Trim43bP86448 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim43bP86448 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim43bP86448 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trim43bP86448 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim43bP86448 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trim43bP86448 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim43bP86448 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim43bP86448 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Trim43bP86448 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim43bP86448 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Trim43bP86448 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim43bP86448 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim43bP86448 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trim43bP86448 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim43bP86448 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim43bP86448 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.38■□□□□ 0.37
Trim43bP86448 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.38■□□□□ 0.37
Trim43bP86448 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim43bP86448 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim43bP86448 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Trim43bP86448 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.38■□□□□ 0.37
Trim43bP86448 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim43bP86448 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim43bP86448 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim43bP86448 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trim43bP86448 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms