Protein–RNA interactions for Protein: P82348

Sgcg, Gamma-sarcoglycan, mousemouse

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcgP82348 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SgcgP82348 Gm27000-201ENSMUST00000182943 842 ntBASIC16.73■□□□□ 0.27
SgcgP82348 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.73■□□□□ 0.27
SgcgP82348 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.73■□□□□ 0.27
SgcgP82348 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SgcgP82348 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
SgcgP82348 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SgcgP82348 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SgcgP82348 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SgcgP82348 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SgcgP82348 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SgcgP82348 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SgcgP82348 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SgcgP82348 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SgcgP82348 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SgcgP82348 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SgcgP82348 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SgcgP82348 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SgcgP82348 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SgcgP82348 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
SgcgP82348 Gm7284-201ENSMUST00000131667 944 ntBASIC16.72■□□□□ 0.27
SgcgP82348 Gm9013-201ENSMUST00000132939 882 ntBASIC16.72■□□□□ 0.27
SgcgP82348 Gm29518-201ENSMUST00000190858 372 ntBASIC16.72■□□□□ 0.27
SgcgP82348 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
SgcgP82348 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SgcgP82348 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SgcgP82348 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SgcgP82348 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SgcgP82348 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.72■□□□□ 0.27
SgcgP82348 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SgcgP82348 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SgcgP82348 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SgcgP82348 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SgcgP82348 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SgcgP82348 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SgcgP82348 Gm14859-201ENSMUST00000117752 357 ntBASIC16.71■□□□□ 0.27
SgcgP82348 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SgcgP82348 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SgcgP82348 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SgcgP82348 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SgcgP82348 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SgcgP82348 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SgcgP82348 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SgcgP82348 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SgcgP82348 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SgcgP82348 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.7■□□□□ 0.26
SgcgP82348 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SgcgP82348 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.7■□□□□ 0.26
SgcgP82348 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SgcgP82348 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SgcgP82348 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SgcgP82348 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SgcgP82348 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
SgcgP82348 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SgcgP82348 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SgcgP82348 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SgcgP82348 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
SgcgP82348 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SgcgP82348 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.7■□□□□ 0.26
SgcgP82348 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
SgcgP82348 Gm17808-201ENSMUST00000200859 894 ntBASIC16.7■□□□□ 0.26
SgcgP82348 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
SgcgP82348 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SgcgP82348 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
SgcgP82348 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SgcgP82348 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SgcgP82348 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SgcgP82348 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SgcgP82348 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SgcgP82348 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SgcgP82348 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SgcgP82348 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
SgcgP82348 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SgcgP82348 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.69■□□□□ 0.26
SgcgP82348 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SgcgP82348 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SgcgP82348 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SgcgP82348 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SgcgP82348 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
SgcgP82348 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SgcgP82348 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SgcgP82348 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
SgcgP82348 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.69■□□□□ 0.26
SgcgP82348 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SgcgP82348 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SgcgP82348 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SgcgP82348 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SgcgP82348 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SgcgP82348 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SgcgP82348 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SgcgP82348 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SgcgP82348 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SgcgP82348 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SgcgP82348 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SgcgP82348 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SgcgP82348 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SgcgP82348 Gm37722-201ENSMUST00000193757 208 ntBASIC16.68■□□□□ 0.26
SgcgP82348 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SgcgP82348 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SgcgP82348 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms