Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdlim4P70271 Gm37025-201ENSMUST00000195159 829 ntBASIC14.11□□□□□ -0.15
Pdlim4P70271 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdlim4P70271 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC14.11□□□□□ -0.15
Pdlim4P70271 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.11□□□□□ -0.15
Pdlim4P70271 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdlim4P70271 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.11□□□□□ -0.15
Pdlim4P70271 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Pdlim4P70271 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pdlim4P70271 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.11□□□□□ -0.15
Pdlim4P70271 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Pdlim4P70271 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdlim4P70271 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.11□□□□□ -0.15
Pdlim4P70271 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Pdlim4P70271 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdlim4P70271 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdlim4P70271 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdlim4P70271 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.1□□□□□ -0.15
Pdlim4P70271 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Pdlim4P70271 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim4P70271 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim4P70271 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Pdlim4P70271 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim4P70271 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Pdlim4P70271 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.1□□□□□ -0.15
Pdlim4P70271 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim4P70271 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim4P70271 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim4P70271 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC14.1□□□□□ -0.15
Pdlim4P70271 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Pdlim4P70271 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.1□□□□□ -0.15
Pdlim4P70271 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim4P70271 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.1□□□□□ -0.15
Pdlim4P70271 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim4P70271 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Pdlim4P70271 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim4P70271 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim4P70271 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.1□□□□□ -0.15
Pdlim4P70271 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim4P70271 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim4P70271 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim4P70271 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim4P70271 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim4P70271 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim4P70271 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdlim4P70271 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim4P70271 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim4P70271 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Pdlim4P70271 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Pdlim4P70271 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim4P70271 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim4P70271 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim4P70271 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim4P70271 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Pdlim4P70271 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim4P70271 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Pdlim4P70271 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim4P70271 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim4P70271 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Pdlim4P70271 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.09□□□□□ -0.15
Pdlim4P70271 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Pdlim4P70271 Gm30025-201ENSMUST00000218555 728 ntBASIC14.09□□□□□ -0.15
Pdlim4P70271 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.09□□□□□ -0.15
Pdlim4P70271 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim4P70271 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim4P70271 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim4P70271 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim4P70271 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.09□□□□□ -0.15
Pdlim4P70271 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.09□□□□□ -0.15
Pdlim4P70271 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdlim4P70271 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pdlim4P70271 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pdlim4P70271 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pdlim4P70271 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pdlim4P70271 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pdlim4P70271 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Pdlim4P70271 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim4P70271 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim4P70271 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim4P70271 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim4P70271 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim4P70271 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim4P70271 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim4P70271 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim4P70271 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim4P70271 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim4P70271 Gm7638-201ENSMUST00000121348 967 ntBASIC14.08□□□□□ -0.16
Pdlim4P70271 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.08□□□□□ -0.16
Pdlim4P70271 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.08□□□□□ -0.16
Pdlim4P70271 Gm27463-201ENSMUST00000183569 57 ntBASIC14.08□□□□□ -0.16
Pdlim4P70271 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Pdlim4P70271 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim4P70271 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim4P70271 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim4P70271 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim4P70271 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Pdlim4P70271 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim4P70271 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdlim4P70271 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim4P70271 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms