Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ThraP63058 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ThraP63058 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.16■□□□□ 0.34
ThraP63058 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ThraP63058 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ThraP63058 Haglr-201ENSMUST00000100000 2085 ntBASIC17.16■□□□□ 0.34
ThraP63058 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ThraP63058 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ThraP63058 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.15■□□□□ 0.34
ThraP63058 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
ThraP63058 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ThraP63058 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ThraP63058 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ThraP63058 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ThraP63058 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ThraP63058 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.15■□□□□ 0.34
ThraP63058 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ThraP63058 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ThraP63058 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
ThraP63058 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ThraP63058 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ThraP63058 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ThraP63058 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ThraP63058 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
ThraP63058 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ThraP63058 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ThraP63058 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ThraP63058 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ThraP63058 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
ThraP63058 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ThraP63058 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
ThraP63058 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
ThraP63058 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ThraP63058 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.14■□□□□ 0.33
ThraP63058 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ThraP63058 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ThraP63058 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
ThraP63058 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.14■□□□□ 0.33
ThraP63058 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
ThraP63058 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.14■□□□□ 0.33
ThraP63058 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.14■□□□□ 0.33
ThraP63058 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.14■□□□□ 0.33
ThraP63058 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ThraP63058 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ThraP63058 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.14■□□□□ 0.33
ThraP63058 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ThraP63058 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ThraP63058 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ThraP63058 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ThraP63058 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ThraP63058 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ThraP63058 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ThraP63058 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ThraP63058 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ThraP63058 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ThraP63058 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ThraP63058 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ThraP63058 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ThraP63058 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ThraP63058 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.13■□□□□ 0.33
ThraP63058 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
ThraP63058 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
ThraP63058 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ThraP63058 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ThraP63058 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ThraP63058 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ThraP63058 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ThraP63058 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ThraP63058 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ThraP63058 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ThraP63058 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ThraP63058 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.13■□□□□ 0.33
ThraP63058 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ThraP63058 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.12■□□□□ 0.33
ThraP63058 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ThraP63058 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ThraP63058 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ThraP63058 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ThraP63058 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.12■□□□□ 0.33
ThraP63058 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ThraP63058 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.12■□□□□ 0.33
ThraP63058 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ThraP63058 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ThraP63058 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ThraP63058 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
ThraP63058 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ThraP63058 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ThraP63058 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ThraP63058 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ThraP63058 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
ThraP63058 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ThraP63058 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ThraP63058 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ThraP63058 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ThraP63058 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.11■□□□□ 0.33
ThraP63058 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ThraP63058 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.11■□□□□ 0.33
ThraP63058 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ThraP63058 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ThraP63058 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms