Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Rpl39P62892 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Rpl39P62892 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rpl39P62892 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl39P62892 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl39P62892 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl39P62892 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl39P62892 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Rpl39P62892 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC12.14□□□□□ -0.47
Rpl39P62892 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl39P62892 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl39P62892 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Rpl39P62892 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl39P62892 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl39P62892 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl39P62892 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl39P62892 Gm38285-201ENSMUST00000192928 922 ntBASIC12.14□□□□□ -0.47
Rpl39P62892 Gm2011-201ENSMUST00000203124 1263 ntBASIC12.14□□□□□ -0.47
Rpl39P62892 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl39P62892 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl39P62892 CT010478.1-201ENSMUST00000220747 2787 ntBASIC12.14□□□□□ -0.47
Rpl39P62892 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl39P62892 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl39P62892 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC12.14□□□□□ -0.47
Rpl39P62892 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl39P62892 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl39P62892 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Rpl39P62892 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl39P62892 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl39P62892 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl39P62892 Gm13509-201ENSMUST00000119733 1308 ntBASIC12.13□□□□□ -0.47
Rpl39P62892 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rpl39P62892 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl39P62892 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Rpl39P62892 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl39P62892 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl39P62892 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl39P62892 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl39P62892 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl39P62892 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl39P62892 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rpl39P62892 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC12.13□□□□□ -0.47
Rpl39P62892 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl39P62892 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC12.13□□□□□ -0.47
Rpl39P62892 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl39P62892 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Rpl39P62892 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Rpl39P62892 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC12.13□□□□□ -0.47
Rpl39P62892 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl39P62892 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl39P62892 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Rpl39P62892 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl39P62892 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Rpl39P62892 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl39P62892 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl39P62892 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl39P62892 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl39P62892 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl39P62892 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl39P62892 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl39P62892 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl39P62892 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl39P62892 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl39P62892 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl39P62892 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl39P62892 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl39P62892 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Rpl39P62892 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Rpl39P62892 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl39P62892 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl39P62892 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl39P62892 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Rpl39P62892 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl39P62892 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl39P62892 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl39P62892 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Rpl39P62892 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC12.12□□□□□ -0.47
Rpl39P62892 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl39P62892 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC12.12□□□□□ -0.47
Rpl39P62892 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl39P62892 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl39P62892 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC12.12□□□□□ -0.47
Rpl39P62892 Gm7514-201ENSMUST00000209475 934 ntBASIC12.12□□□□□ -0.47
Rpl39P62892 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Rpl39P62892 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl39P62892 AC069562.2-201ENSMUST00000224644 2146 ntBASIC12.12□□□□□ -0.47
Rpl39P62892 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Rpl39P62892 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl39P62892 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl39P62892 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl39P62892 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl39P62892 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl39P62892 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Rpl39P62892 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl39P62892 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC12.11□□□□□ -0.47
Rpl39P62892 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpl39P62892 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Rpl39P62892 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpl39P62892 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpl39P62892 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms