Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm6P62313 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm6P62313 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm6P62313 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Lsm6P62313 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm6P62313 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm6P62313 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm6P62313 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm6P62313 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm6P62313 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm6P62313 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm6P62313 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm6P62313 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Lsm6P62313 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm6P62313 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm6P62313 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Lsm6P62313 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm6P62313 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm6P62313 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC14.85□□□□□ -0.03
Lsm6P62313 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.85□□□□□ -0.03
Lsm6P62313 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.85□□□□□ -0.03
Lsm6P62313 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm6P62313 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm6P62313 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm6P62313 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm6P62313 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm6P62313 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm6P62313 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm6P62313 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Lsm6P62313 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Lsm6P62313 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Lsm6P62313 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm6P62313 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm6P62313 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Lsm6P62313 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm6P62313 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Lsm6P62313 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Lsm6P62313 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm6P62313 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm6P62313 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm6P62313 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm6P62313 Mir5122-201ENSMUST00000175004 89 ntBASIC14.84□□□□□ -0.03
Lsm6P62313 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm6P62313 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm6P62313 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm6P62313 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm6P62313 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm6P62313 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm6P62313 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm6P62313 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm6P62313 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm6P62313 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm6P62313 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm6P62313 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.83□□□□□ -0.03
Lsm6P62313 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm6P62313 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm6P62313 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm6P62313 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm6P62313 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm6P62313 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm6P62313 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm6P62313 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm6P62313 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.83□□□□□ -0.04
Lsm6P62313 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.83□□□□□ -0.04
Lsm6P62313 Gm27000-201ENSMUST00000182943 842 ntBASIC14.83□□□□□ -0.04
Lsm6P62313 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.83□□□□□ -0.04
Lsm6P62313 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm6P62313 Gm7791-201ENSMUST00000219066 539 ntBASIC14.83□□□□□ -0.04
Lsm6P62313 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm6P62313 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.83□□□□□ -0.04
Lsm6P62313 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm6P62313 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm6P62313 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm6P62313 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
Lsm6P62313 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm6P62313 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm6P62313 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm6P62313 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm6P62313 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm6P62313 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm6P62313 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm6P62313 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm6P62313 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm6P62313 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm6P62313 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm6P62313 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm6P62313 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm6P62313 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm6P62313 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm6P62313 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Lsm6P62313 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm6P62313 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Lsm6P62313 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm6P62313 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.82□□□□□ -0.04
Lsm6P62313 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.82□□□□□ -0.04
Lsm6P62313 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.82□□□□□ -0.04
Lsm6P62313 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.82□□□□□ -0.04
Lsm6P62313 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.82□□□□□ -0.04
Lsm6P62313 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
Lsm6P62313 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms