Protein–RNA interactions for Protein: P58749

Tm6sf1, Transmembrane 6 superfamily member 1, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf1P58749 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Tm6sf1P58749 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tm6sf1P58749 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC20.79■□□□□ 0.92
Tm6sf1P58749 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tm6sf1P58749 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Tm6sf1P58749 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tm6sf1P58749 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Tm6sf1P58749 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tm6sf1P58749 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Tm6sf1P58749 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Tm6sf1P58749 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tm6sf1P58749 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC20.78■□□□□ 0.92
Tm6sf1P58749 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC20.78■□□□□ 0.92
Tm6sf1P58749 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Tm6sf1P58749 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
Tm6sf1P58749 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Tm6sf1P58749 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tm6sf1P58749 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Tm6sf1P58749 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Tm6sf1P58749 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tm6sf1P58749 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Tm6sf1P58749 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tm6sf1P58749 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tm6sf1P58749 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Tm6sf1P58749 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tm6sf1P58749 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Tm6sf1P58749 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Tm6sf1P58749 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tm6sf1P58749 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Tm6sf1P58749 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC20.77■□□□□ 0.92
Tm6sf1P58749 Gm18032-201ENSMUST00000222541 538 ntBASIC20.77■□□□□ 0.92
Tm6sf1P58749 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tm6sf1P58749 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tm6sf1P58749 Gm45244-201ENSMUST00000211328 2200 ntBASIC20.77■□□□□ 0.91
Tm6sf1P58749 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Tm6sf1P58749 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Tm6sf1P58749 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tm6sf1P58749 Gm45774-201ENSMUST00000211992 2665 ntBASIC20.76■□□□□ 0.91
Tm6sf1P58749 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tm6sf1P58749 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Tm6sf1P58749 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Tm6sf1P58749 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC20.76■□□□□ 0.91
Tm6sf1P58749 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tm6sf1P58749 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Tm6sf1P58749 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tm6sf1P58749 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tm6sf1P58749 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tm6sf1P58749 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tm6sf1P58749 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tm6sf1P58749 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC20.76■□□□□ 0.91
Tm6sf1P58749 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tm6sf1P58749 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tm6sf1P58749 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC20.75■□□□□ 0.91
Tm6sf1P58749 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tm6sf1P58749 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tm6sf1P58749 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Tm6sf1P58749 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tm6sf1P58749 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tm6sf1P58749 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Tm6sf1P58749 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC20.75■□□□□ 0.91
Tm6sf1P58749 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Tm6sf1P58749 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Tm6sf1P58749 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Tm6sf1P58749 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC20.75■□□□□ 0.91
Tm6sf1P58749 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC20.75■□□□□ 0.91
Tm6sf1P58749 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Tm6sf1P58749 Gm10231-201ENSMUST00000181584 441 ntBASIC20.75■□□□□ 0.91
Tm6sf1P58749 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tm6sf1P58749 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Tm6sf1P58749 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Tm6sf1P58749 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.75■□□□□ 0.91
Tm6sf1P58749 Gm10175-202ENSMUST00000208752 441 ntBASIC20.75■□□□□ 0.91
Tm6sf1P58749 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tm6sf1P58749 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Tm6sf1P58749 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tm6sf1P58749 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Tm6sf1P58749 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tm6sf1P58749 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC20.75■□□□□ 0.91
Tm6sf1P58749 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Tm6sf1P58749 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Tm6sf1P58749 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tm6sf1P58749 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tm6sf1P58749 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Tm6sf1P58749 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Tm6sf1P58749 Gm44450-201ENSMUST00000199528 114 ntBASIC20.74■□□□□ 0.91
Tm6sf1P58749 AC134329.2-201ENSMUST00000217897 428 ntBASIC20.74■□□□□ 0.91
Tm6sf1P58749 Gm18115-201ENSMUST00000221209 621 ntBASIC20.74■□□□□ 0.91
Tm6sf1P58749 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tm6sf1P58749 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tm6sf1P58749 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tm6sf1P58749 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tm6sf1P58749 Cxcl14-202ENSMUST00000224801 1467 ntBASIC20.74■□□□□ 0.91
Tm6sf1P58749 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tm6sf1P58749 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.74■□□□□ 0.91
Tm6sf1P58749 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tm6sf1P58749 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tm6sf1P58749 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tm6sf1P58749 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tm6sf1P58749 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tm6sf1P58749 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms