Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ctdsp1P58466 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC13.34□□□□□ -0.27
Ctdsp1P58466 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC13.34□□□□□ -0.27
Ctdsp1P58466 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC13.34□□□□□ -0.27
Ctdsp1P58466 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ctdsp1P58466 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ctdsp1P58466 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Ctdsp1P58466 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ctdsp1P58466 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ctdsp1P58466 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ctdsp1P58466 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ctdsp1P58466 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ctdsp1P58466 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ctdsp1P58466 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ctdsp1P58466 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ctdsp1P58466 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.34□□□□□ -0.27
Ctdsp1P58466 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ctdsp1P58466 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ctdsp1P58466 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ctdsp1P58466 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ctdsp1P58466 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Ctdsp1P58466 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ctdsp1P58466 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Ctdsp1P58466 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Ctdsp1P58466 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ctdsp1P58466 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC13.33□□□□□ -0.27
Ctdsp1P58466 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Ctdsp1P58466 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ctdsp1P58466 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ctdsp1P58466 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ctdsp1P58466 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ctdsp1P58466 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ctdsp1P58466 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ctdsp1P58466 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ctdsp1P58466 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ctdsp1P58466 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC13.33□□□□□ -0.28
Ctdsp1P58466 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ctdsp1P58466 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ctdsp1P58466 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ctdsp1P58466 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ctdsp1P58466 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ctdsp1P58466 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ctdsp1P58466 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ctdsp1P58466 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ctdsp1P58466 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ctdsp1P58466 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Ctdsp1P58466 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ctdsp1P58466 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ctdsp1P58466 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ctdsp1P58466 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Ctdsp1P58466 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ctdsp1P58466 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ctdsp1P58466 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ctdsp1P58466 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ctdsp1P58466 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ctdsp1P58466 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ctdsp1P58466 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ctdsp1P58466 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ctdsp1P58466 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ctdsp1P58466 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.32□□□□□ -0.28
Ctdsp1P58466 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ctdsp1P58466 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ctdsp1P58466 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ctdsp1P58466 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ctdsp1P58466 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ctdsp1P58466 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ctdsp1P58466 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC13.32□□□□□ -0.28
Ctdsp1P58466 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC13.32□□□□□ -0.28
Ctdsp1P58466 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Ctdsp1P58466 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Ctdsp1P58466 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.32□□□□□ -0.28
Ctdsp1P58466 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ctdsp1P58466 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Ctdsp1P58466 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.32□□□□□ -0.28
Ctdsp1P58466 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ctdsp1P58466 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ctdsp1P58466 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ctdsp1P58466 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ctdsp1P58466 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ctdsp1P58466 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ctdsp1P58466 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ctdsp1P58466 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ctdsp1P58466 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ctdsp1P58466 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ctdsp1P58466 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ctdsp1P58466 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ctdsp1P58466 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ctdsp1P58466 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ctdsp1P58466 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ctdsp1P58466 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Ctdsp1P58466 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ctdsp1P58466 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ctdsp1P58466 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ctdsp1P58466 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ctdsp1P58466 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ctdsp1P58466 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ctdsp1P58466 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ctdsp1P58466 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ctdsp1P58466 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ctdsp1P58466 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms