Protein–RNA interactions for Protein: P57080

Usp25, Ubiquitin carboxyl-terminal hydrolase 25, mousemouse

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp25P57080 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Usp25P57080 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp25P57080 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp25P57080 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp25P57080 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp25P57080 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp25P57080 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Usp25P57080 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Usp25P57080 Gm11643-201ENSMUST00000119578 864 ntBASIC19.22■□□□□ 0.67
Usp25P57080 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.22■□□□□ 0.67
Usp25P57080 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.22■□□□□ 0.67
Usp25P57080 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp25P57080 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.22■□□□□ 0.67
Usp25P57080 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp25P57080 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Usp25P57080 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Usp25P57080 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp25P57080 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp25P57080 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp25P57080 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Usp25P57080 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp25P57080 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp25P57080 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Usp25P57080 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp25P57080 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Usp25P57080 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp25P57080 Gm12933-201ENSMUST00000120203 872 ntBASIC19.21■□□□□ 0.67
Usp25P57080 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Usp25P57080 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp25P57080 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Usp25P57080 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp25P57080 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp25P57080 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp25P57080 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp25P57080 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp25P57080 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp25P57080 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Usp25P57080 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.2■□□□□ 0.66
Usp25P57080 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp25P57080 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp25P57080 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Usp25P57080 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp25P57080 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp25P57080 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.2■□□□□ 0.66
Usp25P57080 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.2■□□□□ 0.66
Usp25P57080 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Usp25P57080 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Usp25P57080 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Usp25P57080 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Usp25P57080 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp25P57080 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Usp25P57080 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp25P57080 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp25P57080 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp25P57080 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp25P57080 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp25P57080 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp25P57080 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp25P57080 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Usp25P57080 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Usp25P57080 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Usp25P57080 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp25P57080 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp25P57080 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.19■□□□□ 0.66
Usp25P57080 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.19■□□□□ 0.66
Usp25P57080 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Usp25P57080 Gm10602-201ENSMUST00000098239 609 ntBASIC19.19■□□□□ 0.66
Usp25P57080 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp25P57080 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp25P57080 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp25P57080 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp25P57080 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp25P57080 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC19.19■□□□□ 0.66
Usp25P57080 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Usp25P57080 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Usp25P57080 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp25P57080 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Usp25P57080 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Usp25P57080 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp25P57080 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Usp25P57080 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp25P57080 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp25P57080 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Usp25P57080 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.18■□□□□ 0.66
Usp25P57080 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp25P57080 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp25P57080 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp25P57080 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC19.18■□□□□ 0.66
Usp25P57080 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp25P57080 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Usp25P57080 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.18■□□□□ 0.66
Usp25P57080 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp25P57080 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Usp25P57080 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp25P57080 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp25P57080 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp25P57080 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.18■□□□□ 0.66
Usp25P57080 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp25P57080 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp25P57080 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms