Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SmoP56726 Gm25016-201ENSMUST00000158399 131 ntBASIC17.06■□□□□ 0.32
SmoP56726 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SmoP56726 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SmoP56726 Gm5587-201ENSMUST00000206270 674 ntBASIC17.06■□□□□ 0.32
SmoP56726 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SmoP56726 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SmoP56726 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SmoP56726 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SmoP56726 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SmoP56726 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SmoP56726 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SmoP56726 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SmoP56726 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SmoP56726 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
SmoP56726 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SmoP56726 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SmoP56726 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SmoP56726 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SmoP56726 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SmoP56726 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.05■□□□□ 0.32
SmoP56726 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SmoP56726 Gm9013-201ENSMUST00000132939 882 ntBASIC17.05■□□□□ 0.32
SmoP56726 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SmoP56726 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.05■□□□□ 0.32
SmoP56726 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.05■□□□□ 0.32
SmoP56726 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SmoP56726 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SmoP56726 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SmoP56726 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SmoP56726 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SmoP56726 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SmoP56726 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SmoP56726 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SmoP56726 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SmoP56726 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SmoP56726 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.05■□□□□ 0.32
SmoP56726 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SmoP56726 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SmoP56726 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SmoP56726 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SmoP56726 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SmoP56726 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SmoP56726 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SmoP56726 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.04■□□□□ 0.32
SmoP56726 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SmoP56726 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SmoP56726 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SmoP56726 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SmoP56726 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SmoP56726 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SmoP56726 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SmoP56726 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SmoP56726 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SmoP56726 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SmoP56726 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SmoP56726 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SmoP56726 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SmoP56726 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SmoP56726 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SmoP56726 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SmoP56726 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SmoP56726 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.04■□□□□ 0.32
SmoP56726 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SmoP56726 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SmoP56726 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SmoP56726 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SmoP56726 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SmoP56726 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.03■□□□□ 0.32
SmoP56726 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SmoP56726 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SmoP56726 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SmoP56726 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SmoP56726 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SmoP56726 Phf7-203ENSMUST00000226565 1971 ntBASIC17.03■□□□□ 0.32
SmoP56726 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SmoP56726 Gm37722-201ENSMUST00000193757 208 ntBASIC17.03■□□□□ 0.32
SmoP56726 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.03■□□□□ 0.32
SmoP56726 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SmoP56726 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SmoP56726 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SmoP56726 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SmoP56726 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.03■□□□□ 0.32
SmoP56726 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SmoP56726 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SmoP56726 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.03■□□□□ 0.32
SmoP56726 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.03■□□□□ 0.32
SmoP56726 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SmoP56726 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SmoP56726 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SmoP56726 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SmoP56726 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SmoP56726 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SmoP56726 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SmoP56726 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.02■□□□□ 0.32
SmoP56726 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
SmoP56726 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.02■□□□□ 0.32
SmoP56726 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SmoP56726 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SmoP56726 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms