Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
NcanP55066 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NcanP55066 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NcanP55066 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.9■□□□□ 0.46
NcanP55066 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NcanP55066 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC17.9■□□□□ 0.46
NcanP55066 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NcanP55066 Gm9727-201ENSMUST00000161387 555 ntBASIC17.9■□□□□ 0.46
NcanP55066 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NcanP55066 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NcanP55066 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NcanP55066 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
NcanP55066 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.9■□□□□ 0.46
NcanP55066 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NcanP55066 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NcanP55066 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NcanP55066 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NcanP55066 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.89■□□□□ 0.46
NcanP55066 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
NcanP55066 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
NcanP55066 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NcanP55066 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NcanP55066 Gm15653-201ENSMUST00000119247 907 ntBASIC17.89■□□□□ 0.45
NcanP55066 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.89■□□□□ 0.45
NcanP55066 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.89■□□□□ 0.45
NcanP55066 Gm43767-201ENSMUST00000198933 381 ntBASIC17.89■□□□□ 0.45
NcanP55066 Gm7506-201ENSMUST00000207758 815 ntBASIC17.89■□□□□ 0.45
NcanP55066 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.89■□□□□ 0.45
NcanP55066 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.89■□□□□ 0.45
NcanP55066 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.89■□□□□ 0.45
NcanP55066 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NcanP55066 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NcanP55066 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NcanP55066 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NcanP55066 Grk6-206ENSMUST00000224995 2971 ntBASIC17.88■□□□□ 0.45
NcanP55066 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
NcanP55066 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NcanP55066 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NcanP55066 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NcanP55066 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NcanP55066 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NcanP55066 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NcanP55066 Gm25745-201ENSMUST00000174945 133 ntBASIC17.88■□□□□ 0.45
NcanP55066 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.88■□□□□ 0.45
NcanP55066 Gm27628-201ENSMUST00000184911 107 ntBASIC17.88■□□□□ 0.45
NcanP55066 Gm6089-201ENSMUST00000197666 938 ntBASIC17.88■□□□□ 0.45
NcanP55066 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC17.88■□□□□ 0.45
NcanP55066 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC17.88■□□□□ 0.45
NcanP55066 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.88■□□□□ 0.45
NcanP55066 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NcanP55066 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NcanP55066 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NcanP55066 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
NcanP55066 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.88■□□□□ 0.45
NcanP55066 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NcanP55066 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NcanP55066 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NcanP55066 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NcanP55066 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NcanP55066 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NcanP55066 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NcanP55066 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17.87■□□□□ 0.45
NcanP55066 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
NcanP55066 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.87■□□□□ 0.45
NcanP55066 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NcanP55066 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NcanP55066 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NcanP55066 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.87■□□□□ 0.45
NcanP55066 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NcanP55066 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.87■□□□□ 0.45
NcanP55066 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NcanP55066 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
NcanP55066 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.86■□□□□ 0.45
NcanP55066 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NcanP55066 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.86■□□□□ 0.45
NcanP55066 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.86■□□□□ 0.45
NcanP55066 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NcanP55066 Gm4535-201ENSMUST00000182274 558 ntBASIC17.86■□□□□ 0.45
NcanP55066 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NcanP55066 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NcanP55066 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
NcanP55066 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.86■□□□□ 0.45
NcanP55066 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
NcanP55066 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
NcanP55066 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NcanP55066 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NcanP55066 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NcanP55066 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NcanP55066 Gm10355-201ENSMUST00000097146 517 ntBASIC17.86■□□□□ 0.45
NcanP55066 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NcanP55066 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NcanP55066 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NcanP55066 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NcanP55066 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NcanP55066 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NcanP55066 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
NcanP55066 Gm5648-201ENSMUST00000122244 1587 ntBASIC17.86■□□□□ 0.45
NcanP55066 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NcanP55066 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NcanP55066 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms