Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Msh6P54276 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Msh6P54276 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Msh6P54276 Gm25925-201ENSMUST00000158314 306 ntBASIC21.49■■□□□ 1.03
Msh6P54276 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Msh6P54276 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Msh6P54276 AC125350.1-201ENSMUST00000225115 903 ntBASIC21.49■■□□□ 1.03
Msh6P54276 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Msh6P54276 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
Msh6P54276 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Msh6P54276 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Msh6P54276 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Msh6P54276 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Msh6P54276 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC21.49■■□□□ 1.03
Msh6P54276 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Msh6P54276 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Msh6P54276 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC21.49■■□□□ 1.03
Msh6P54276 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Msh6P54276 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Msh6P54276 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Msh6P54276 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Msh6P54276 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Msh6P54276 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Msh6P54276 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Msh6P54276 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Msh6P54276 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Msh6P54276 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Msh6P54276 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Msh6P54276 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Msh6P54276 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Msh6P54276 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Msh6P54276 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Msh6P54276 Gm15372-201ENSMUST00000120729 834 ntBASIC21.48■■□□□ 1.03
Msh6P54276 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Msh6P54276 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Msh6P54276 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Msh6P54276 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Msh6P54276 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Msh6P54276 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Msh6P54276 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Msh6P54276 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Msh6P54276 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Msh6P54276 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
Msh6P54276 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Msh6P54276 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Msh6P54276 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC21.47■■□□□ 1.03
Msh6P54276 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Msh6P54276 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Msh6P54276 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Msh6P54276 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Msh6P54276 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Msh6P54276 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Msh6P54276 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Msh6P54276 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Msh6P54276 Phf7-203ENSMUST00000226565 1971 ntBASIC21.46■■□□□ 1.03
Msh6P54276 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Msh6P54276 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC21.46■■□□□ 1.03
Msh6P54276 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Msh6P54276 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Msh6P54276 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC21.46■■□□□ 1.03
Msh6P54276 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC21.46■■□□□ 1.03
Msh6P54276 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC21.46■■□□□ 1.03
Msh6P54276 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Msh6P54276 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Msh6P54276 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC21.46■■□□□ 1.03
Msh6P54276 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Msh6P54276 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.03
Msh6P54276 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.03
Msh6P54276 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Msh6P54276 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Msh6P54276 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Msh6P54276 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Msh6P54276 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Msh6P54276 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Msh6P54276 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC21.45■■□□□ 1.02
Msh6P54276 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Msh6P54276 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC21.45■■□□□ 1.02
Msh6P54276 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC21.45■■□□□ 1.02
Msh6P54276 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Msh6P54276 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC21.45■■□□□ 1.02
Msh6P54276 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Msh6P54276 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC21.45■■□□□ 1.02
Msh6P54276 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Msh6P54276 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Msh6P54276 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Msh6P54276 Gm11336-201ENSMUST00000118168 334 ntBASIC21.44■■□□□ 1.02
Msh6P54276 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC21.44■■□□□ 1.02
Msh6P54276 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Msh6P54276 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC21.44■■□□□ 1.02
Msh6P54276 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Msh6P54276 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Msh6P54276 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Msh6P54276 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Msh6P54276 Gm6190-201ENSMUST00000220683 1374 ntBASIC21.44■■□□□ 1.02
Msh6P54276 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Msh6P54276 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Msh6P54276 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Msh6P54276 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Msh6P54276 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Msh6P54276 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC21.43■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms