Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.78■□□□□ 0.28
Pdx1P52946 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Pdx1P52946 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Pdx1P52946 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pdx1P52946 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.78■□□□□ 0.28
Pdx1P52946 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pdx1P52946 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pdx1P52946 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.78■□□□□ 0.28
Pdx1P52946 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pdx1P52946 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pdx1P52946 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.78■□□□□ 0.28
Pdx1P52946 Gm7889-201ENSMUST00000185591 958 ntBASIC16.78■□□□□ 0.28
Pdx1P52946 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pdx1P52946 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pdx1P52946 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pdx1P52946 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.78■□□□□ 0.28
Pdx1P52946 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Pdx1P52946 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Pdx1P52946 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pdx1P52946 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pdx1P52946 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pdx1P52946 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pdx1P52946 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Pdx1P52946 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pdx1P52946 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.77■□□□□ 0.28
Pdx1P52946 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Pdx1P52946 Gm18958-201ENSMUST00000174258 762 ntBASIC16.77■□□□□ 0.28
Pdx1P52946 Gm7370-201ENSMUST00000219471 767 ntBASIC16.77■□□□□ 0.28
Pdx1P52946 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pdx1P52946 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pdx1P52946 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pdx1P52946 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pdx1P52946 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Pdx1P52946 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.77■□□□□ 0.27
Pdx1P52946 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.77■□□□□ 0.27
Pdx1P52946 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Pdx1P52946 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.77■□□□□ 0.27
Pdx1P52946 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pdx1P52946 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pdx1P52946 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pdx1P52946 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.77■□□□□ 0.27
Pdx1P52946 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pdx1P52946 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pdx1P52946 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pdx1P52946 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Pdx1P52946 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pdx1P52946 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pdx1P52946 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pdx1P52946 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.76■□□□□ 0.27
Pdx1P52946 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.76■□□□□ 0.27
Pdx1P52946 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Pdx1P52946 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.76■□□□□ 0.27
Pdx1P52946 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pdx1P52946 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pdx1P52946 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pdx1P52946 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pdx1P52946 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pdx1P52946 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Pdx1P52946 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pdx1P52946 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pdx1P52946 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pdx1P52946 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pdx1P52946 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pdx1P52946 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pdx1P52946 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pdx1P52946 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pdx1P52946 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pdx1P52946 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Pdx1P52946 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pdx1P52946 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Pdx1P52946 Gm2274-201ENSMUST00000184539 609 ntBASIC16.75■□□□□ 0.27
Pdx1P52946 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.75■□□□□ 0.27
Pdx1P52946 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Pdx1P52946 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pdx1P52946 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.75■□□□□ 0.27
Pdx1P52946 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pdx1P52946 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pdx1P52946 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pdx1P52946 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pdx1P52946 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pdx1P52946 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Pdx1P52946 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Pdx1P52946 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Pdx1P52946 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Pdx1P52946 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pdx1P52946 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pdx1P52946 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pdx1P52946 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pdx1P52946 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pdx1P52946 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.73■□□□□ 0.27
Pdx1P52946 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pdx1P52946 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Pdx1P52946 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Pdx1P52946 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pdx1P52946 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pdx1P52946 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.73■□□□□ 0.27
Pdx1P52946 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.73■□□□□ 0.27
Pdx1P52946 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Pdx1P52946 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pdx1P52946 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms