Protein–RNA interactions for Protein: P52019

Sqle, Squalene monooxygenase, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SqleP52019 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
SqleP52019 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SqleP52019 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SqleP52019 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SqleP52019 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
SqleP52019 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC18.39■□□□□ 0.53
SqleP52019 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SqleP52019 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18.39■□□□□ 0.53
SqleP52019 AC154222.1-201ENSMUST00000223882 475 ntBASIC18.39■□□□□ 0.53
SqleP52019 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
SqleP52019 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SqleP52019 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SqleP52019 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SqleP52019 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.39■□□□□ 0.53
SqleP52019 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SqleP52019 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SqleP52019 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SqleP52019 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SqleP52019 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SqleP52019 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SqleP52019 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SqleP52019 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SqleP52019 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SqleP52019 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SqleP52019 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SqleP52019 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SqleP52019 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SqleP52019 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.38■□□□□ 0.53
SqleP52019 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
SqleP52019 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.38■□□□□ 0.53
SqleP52019 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SqleP52019 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SqleP52019 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SqleP52019 Gm15590-201ENSMUST00000078419 552 ntBASIC18.38■□□□□ 0.53
SqleP52019 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SqleP52019 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SqleP52019 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SqleP52019 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SqleP52019 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SqleP52019 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SqleP52019 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SqleP52019 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SqleP52019 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SqleP52019 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SqleP52019 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SqleP52019 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SqleP52019 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SqleP52019 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SqleP52019 Gm25990-201ENSMUST00000102440 86 ntBASIC18.37■□□□□ 0.53
SqleP52019 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC18.37■□□□□ 0.53
SqleP52019 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SqleP52019 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
SqleP52019 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SqleP52019 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SqleP52019 Gm26308-201ENSMUST00000157768 69 ntBASIC18.37■□□□□ 0.53
SqleP52019 Gm44450-201ENSMUST00000199528 114 ntBASIC18.37■□□□□ 0.53
SqleP52019 Gm43935-201ENSMUST00000203569 1050 ntBASIC18.37■□□□□ 0.53
SqleP52019 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SqleP52019 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SqleP52019 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SqleP52019 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SqleP52019 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SqleP52019 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SqleP52019 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
SqleP52019 Gm14140-201ENSMUST00000119999 995 ntBASIC18.36■□□□□ 0.53
SqleP52019 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC18.36■□□□□ 0.53
SqleP52019 Gm9727-201ENSMUST00000161387 555 ntBASIC18.36■□□□□ 0.53
SqleP52019 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SqleP52019 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
SqleP52019 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SqleP52019 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SqleP52019 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SqleP52019 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SqleP52019 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SqleP52019 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SqleP52019 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SqleP52019 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SqleP52019 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SqleP52019 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.35■□□□□ 0.53
SqleP52019 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SqleP52019 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SqleP52019 Gm4995-201ENSMUST00000117247 432 ntBASIC18.35■□□□□ 0.53
SqleP52019 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SqleP52019 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SqleP52019 Gm45683-201ENSMUST00000210825 1247 ntBASIC18.35■□□□□ 0.53
SqleP52019 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
SqleP52019 Gm5186-201ENSMUST00000218781 920 ntBASIC18.35■□□□□ 0.53
SqleP52019 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SqleP52019 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SqleP52019 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SqleP52019 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SqleP52019 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.35■□□□□ 0.53
SqleP52019 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SqleP52019 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SqleP52019 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SqleP52019 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SqleP52019 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SqleP52019 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SqleP52019 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SqleP52019 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms