Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shmt1P50431 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Shmt1P50431 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Shmt1P50431 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shmt1P50431 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Shmt1P50431 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Shmt1P50431 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shmt1P50431 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Shmt1P50431 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Shmt1P50431 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shmt1P50431 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shmt1P50431 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shmt1P50431 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shmt1P50431 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Shmt1P50431 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Shmt1P50431 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shmt1P50431 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shmt1P50431 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shmt1P50431 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shmt1P50431 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shmt1P50431 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shmt1P50431 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Shmt1P50431 Gm26039-201ENSMUST00000158152 144 ntBASIC17.92■□□□□ 0.46
Shmt1P50431 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shmt1P50431 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shmt1P50431 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Shmt1P50431 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Shmt1P50431 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shmt1P50431 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shmt1P50431 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Shmt1P50431 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Shmt1P50431 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shmt1P50431 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shmt1P50431 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.92■□□□□ 0.46
Shmt1P50431 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Shmt1P50431 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.92■□□□□ 0.46
Shmt1P50431 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shmt1P50431 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Shmt1P50431 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.91■□□□□ 0.46
Shmt1P50431 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shmt1P50431 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shmt1P50431 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Shmt1P50431 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shmt1P50431 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shmt1P50431 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Shmt1P50431 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.91■□□□□ 0.46
Shmt1P50431 Gm27389-201ENSMUST00000183622 195 ntBASIC17.91■□□□□ 0.46
Shmt1P50431 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Shmt1P50431 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shmt1P50431 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.91■□□□□ 0.46
Shmt1P50431 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.91■□□□□ 0.46
Shmt1P50431 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shmt1P50431 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shmt1P50431 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Shmt1P50431 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shmt1P50431 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shmt1P50431 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shmt1P50431 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shmt1P50431 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shmt1P50431 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Shmt1P50431 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Shmt1P50431 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shmt1P50431 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shmt1P50431 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Shmt1P50431 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shmt1P50431 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.9■□□□□ 0.46
Shmt1P50431 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shmt1P50431 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Shmt1P50431 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Shmt1P50431 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Shmt1P50431 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Shmt1P50431 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
Shmt1P50431 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Shmt1P50431 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shmt1P50431 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shmt1P50431 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Shmt1P50431 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Shmt1P50431 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Shmt1P50431 AA414768-201ENSMUST00000121924 1257 ntBASIC17.89■□□□□ 0.45
Shmt1P50431 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shmt1P50431 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.89■□□□□ 0.45
Shmt1P50431 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shmt1P50431 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shmt1P50431 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Shmt1P50431 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shmt1P50431 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shmt1P50431 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shmt1P50431 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shmt1P50431 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shmt1P50431 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Shmt1P50431 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.88■□□□□ 0.45
Shmt1P50431 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shmt1P50431 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Shmt1P50431 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shmt1P50431 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shmt1P50431 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shmt1P50431 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Shmt1P50431 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Shmt1P50431 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.88■□□□□ 0.45
Shmt1P50431 Gm6345-202ENSMUST00000180900 204 ntBASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms