Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GdnfP48540 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GdnfP48540 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GdnfP48540 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
GdnfP48540 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GdnfP48540 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
GdnfP48540 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GdnfP48540 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GdnfP48540 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GdnfP48540 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
GdnfP48540 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
GdnfP48540 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GdnfP48540 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GdnfP48540 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GdnfP48540 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GdnfP48540 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GdnfP48540 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GdnfP48540 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GdnfP48540 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GdnfP48540 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
GdnfP48540 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GdnfP48540 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
GdnfP48540 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GdnfP48540 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GdnfP48540 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
GdnfP48540 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GdnfP48540 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
GdnfP48540 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GdnfP48540 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC14.86□□□□□ -0.03
GdnfP48540 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
GdnfP48540 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
GdnfP48540 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
GdnfP48540 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.86□□□□□ -0.03
GdnfP48540 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GdnfP48540 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
GdnfP48540 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.85□□□□□ -0.03
GdnfP48540 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.85□□□□□ -0.03
GdnfP48540 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GdnfP48540 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC14.85□□□□□ -0.03
GdnfP48540 Gm11249-201ENSMUST00000117071 859 ntBASIC14.85□□□□□ -0.03
GdnfP48540 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
GdnfP48540 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GdnfP48540 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
GdnfP48540 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GdnfP48540 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GdnfP48540 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GdnfP48540 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GdnfP48540 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
GdnfP48540 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
GdnfP48540 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
GdnfP48540 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GdnfP48540 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GdnfP48540 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.85□□□□□ -0.03
GdnfP48540 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GdnfP48540 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GdnfP48540 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
GdnfP48540 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.84□□□□□ -0.03
GdnfP48540 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
GdnfP48540 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
GdnfP48540 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
GdnfP48540 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GdnfP48540 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GdnfP48540 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC14.84□□□□□ -0.03
GdnfP48540 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC14.84□□□□□ -0.03
GdnfP48540 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC14.84□□□□□ -0.03
GdnfP48540 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
GdnfP48540 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC14.84□□□□□ -0.03
GdnfP48540 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GdnfP48540 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GdnfP48540 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC14.84□□□□□ -0.03
GdnfP48540 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GdnfP48540 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
GdnfP48540 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.84□□□□□ -0.03
GdnfP48540 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.84□□□□□ -0.03
GdnfP48540 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
GdnfP48540 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC14.84□□□□□ -0.03
GdnfP48540 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
GdnfP48540 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.84□□□□□ -0.03
GdnfP48540 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.84□□□□□ -0.03
GdnfP48540 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
GdnfP48540 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
GdnfP48540 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
GdnfP48540 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
GdnfP48540 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
GdnfP48540 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
GdnfP48540 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
GdnfP48540 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GdnfP48540 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
GdnfP48540 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GdnfP48540 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GdnfP48540 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GdnfP48540 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
GdnfP48540 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.83□□□□□ -0.04
GdnfP48540 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
GdnfP48540 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GdnfP48540 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC14.83□□□□□ -0.04
GdnfP48540 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GdnfP48540 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
GdnfP48540 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
GdnfP48540 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms