Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Xcl1P47993 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Xcl1P47993 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC11.12□□□□□ -0.63
Xcl1P47993 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Xcl1P47993 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Xcl1P47993 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC11.12□□□□□ -0.63
Xcl1P47993 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
Xcl1P47993 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Xcl1P47993 AC107452.1-201ENSMUST00000227963 481 ntBASIC11.12□□□□□ -0.63
Xcl1P47993 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Xcl1P47993 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Xcl1P47993 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Xcl1P47993 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Xcl1P47993 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Xcl1P47993 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Xcl1P47993 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Xcl1P47993 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Xcl1P47993 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Xcl1P47993 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Xcl1P47993 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Xcl1P47993 Idnk-204ENSMUST00000226010 1898 ntBASIC11.12□□□□□ -0.63
Xcl1P47993 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Xcl1P47993 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Xcl1P47993 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Xcl1P47993 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC11.12□□□□□ -0.63
Xcl1P47993 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Xcl1P47993 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Xcl1P47993 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Xcl1P47993 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Xcl1P47993 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC11.11□□□□□ -0.63
Xcl1P47993 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Xcl1P47993 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Xcl1P47993 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Xcl1P47993 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Xcl1P47993 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Xcl1P47993 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Xcl1P47993 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Xcl1P47993 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Xcl1P47993 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Xcl1P47993 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Xcl1P47993 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Xcl1P47993 Gm16464-201ENSMUST00000117815 1095 ntBASIC11.11□□□□□ -0.63
Xcl1P47993 Gm8503-201ENSMUST00000118131 455 ntBASIC11.11□□□□□ -0.63
Xcl1P47993 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC11.11□□□□□ -0.63
Xcl1P47993 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Xcl1P47993 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Xcl1P47993 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Xcl1P47993 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Xcl1P47993 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC11.11□□□□□ -0.63
Xcl1P47993 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Xcl1P47993 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Xcl1P47993 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Xcl1P47993 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Xcl1P47993 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Xcl1P47993 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Xcl1P47993 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Xcl1P47993 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Xcl1P47993 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Xcl1P47993 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Xcl1P47993 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Xcl1P47993 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Xcl1P47993 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Xcl1P47993 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Xcl1P47993 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC11.11□□□□□ -0.63
Xcl1P47993 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC11.11□□□□□ -0.63
Xcl1P47993 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Xcl1P47993 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Xcl1P47993 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Xcl1P47993 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Xcl1P47993 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Xcl1P47993 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Xcl1P47993 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Xcl1P47993 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Xcl1P47993 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Xcl1P47993 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Xcl1P47993 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Xcl1P47993 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC11.1□□□□□ -0.63
Xcl1P47993 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Xcl1P47993 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Xcl1P47993 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Xcl1P47993 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Xcl1P47993 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Xcl1P47993 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Xcl1P47993 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Xcl1P47993 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Xcl1P47993 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Xcl1P47993 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Xcl1P47993 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Xcl1P47993 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Xcl1P47993 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Xcl1P47993 Gm44544-201ENSMUST00000207052 1844 ntBASIC11.09□□□□□ -0.63
Xcl1P47993 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Xcl1P47993 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Xcl1P47993 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Xcl1P47993 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Xcl1P47993 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Xcl1P47993 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Xcl1P47993 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Xcl1P47993 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Xcl1P47993 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms