Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Gm43183-201ENSMUST00000200632 547 ntBASIC17.22■□□□□ 0.35
Vps4bP46467 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps4bP46467 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Vps4bP46467 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps4bP46467 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.22■□□□□ 0.35
Vps4bP46467 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.22■□□□□ 0.35
Vps4bP46467 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps4bP46467 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps4bP46467 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps4bP46467 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.22■□□□□ 0.35
Vps4bP46467 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps4bP46467 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps4bP46467 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Vps4bP46467 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.21■□□□□ 0.35
Vps4bP46467 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps4bP46467 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.21■□□□□ 0.35
Vps4bP46467 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps4bP46467 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps4bP46467 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps4bP46467 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps4bP46467 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps4bP46467 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.21■□□□□ 0.35
Vps4bP46467 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.21■□□□□ 0.35
Vps4bP46467 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Vps4bP46467 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps4bP46467 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Vps4bP46467 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps4bP46467 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Vps4bP46467 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps4bP46467 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps4bP46467 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Vps4bP46467 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps4bP46467 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.2■□□□□ 0.34
Vps4bP46467 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps4bP46467 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Vps4bP46467 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Vps4bP46467 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps4bP46467 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Vps4bP46467 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps4bP46467 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps4bP46467 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps4bP46467 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Vps4bP46467 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps4bP46467 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps4bP46467 Haglr-201ENSMUST00000100000 2085 ntBASIC17.19■□□□□ 0.34
Vps4bP46467 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps4bP46467 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps4bP46467 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps4bP46467 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.19■□□□□ 0.34
Vps4bP46467 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Vps4bP46467 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Vps4bP46467 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps4bP46467 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps4bP46467 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Vps4bP46467 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps4bP46467 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Vps4bP46467 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps4bP46467 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.18■□□□□ 0.34
Vps4bP46467 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps4bP46467 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps4bP46467 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.18■□□□□ 0.34
Vps4bP46467 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Vps4bP46467 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps4bP46467 Gm15378-201ENSMUST00000121894 207 ntBASIC17.18■□□□□ 0.34
Vps4bP46467 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.18■□□□□ 0.34
Vps4bP46467 Gm37025-201ENSMUST00000195159 829 ntBASIC17.18■□□□□ 0.34
Vps4bP46467 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.18■□□□□ 0.34
Vps4bP46467 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Vps4bP46467 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps4bP46467 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Vps4bP46467 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps4bP46467 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps4bP46467 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.18■□□□□ 0.34
Vps4bP46467 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps4bP46467 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Vps4bP46467 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps4bP46467 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.18■□□□□ 0.34
Vps4bP46467 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.17■□□□□ 0.34
Vps4bP46467 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps4bP46467 Gm5643-201ENSMUST00000117081 966 ntBASIC17.17■□□□□ 0.34
Vps4bP46467 Gm13216-201ENSMUST00000117145 591 ntBASIC17.17■□□□□ 0.34
Vps4bP46467 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.17■□□□□ 0.34
Vps4bP46467 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Vps4bP46467 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps4bP46467 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.17■□□□□ 0.34
Vps4bP46467 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps4bP46467 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Vps4bP46467 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps4bP46467 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps4bP46467 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Vps4bP46467 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Vps4bP46467 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps4bP46467 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vps4bP46467 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Vps4bP46467 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Vps4bP46467 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps4bP46467 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps4bP46467 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Vps4bP46467 Gm17661-201ENSMUST00000170317 270 ntBASIC17.16■□□□□ 0.34
Vps4bP46467 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms