Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nkx1-2P42580 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nkx1-2P42580 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nkx1-2P42580 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC20.87■□□□□ 0.93
Nkx1-2P42580 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nkx1-2P42580 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nkx1-2P42580 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nkx1-2P42580 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Nkx1-2P42580 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nkx1-2P42580 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nkx1-2P42580 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nkx1-2P42580 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nkx1-2P42580 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC20.86■□□□□ 0.93
Nkx1-2P42580 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Nkx1-2P42580 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Nkx1-2P42580 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.86■□□□□ 0.93
Nkx1-2P42580 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.86■□□□□ 0.93
Nkx1-2P42580 Gm10698-201ENSMUST00000182663 604 ntBASIC20.86■□□□□ 0.93
Nkx1-2P42580 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.86■□□□□ 0.93
Nkx1-2P42580 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nkx1-2P42580 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nkx1-2P42580 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nkx1-2P42580 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC20.86■□□□□ 0.93
Nkx1-2P42580 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC20.86■□□□□ 0.93
Nkx1-2P42580 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nkx1-2P42580 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nkx1-2P42580 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nkx1-2P42580 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nkx1-2P42580 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nkx1-2P42580 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nkx1-2P42580 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC20.86■□□□□ 0.93
Nkx1-2P42580 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nkx1-2P42580 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nkx1-2P42580 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nkx1-2P42580 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nkx1-2P42580 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nkx1-2P42580 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nkx1-2P42580 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Nkx1-2P42580 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Nkx1-2P42580 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nkx1-2P42580 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Nkx1-2P42580 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Nkx1-2P42580 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nkx1-2P42580 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nkx1-2P42580 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Nkx1-2P42580 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Nkx1-2P42580 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Nkx1-2P42580 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nkx1-2P42580 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
Nkx1-2P42580 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nkx1-2P42580 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nkx1-2P42580 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.84■□□□□ 0.93
Nkx1-2P42580 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nkx1-2P42580 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Nkx1-2P42580 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Nkx1-2P42580 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Nkx1-2P42580 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nkx1-2P42580 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nkx1-2P42580 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nkx1-2P42580 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nkx1-2P42580 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nkx1-2P42580 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nkx1-2P42580 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nkx1-2P42580 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nkx1-2P42580 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nkx1-2P42580 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nkx1-2P42580 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.83■□□□□ 0.93
Nkx1-2P42580 Gm24841-201ENSMUST00000158676 357 ntBASIC20.83■□□□□ 0.93
Nkx1-2P42580 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Nkx1-2P42580 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nkx1-2P42580 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nkx1-2P42580 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nkx1-2P42580 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nkx1-2P42580 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nkx1-2P42580 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nkx1-2P42580 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Nkx1-2P42580 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nkx1-2P42580 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nkx1-2P42580 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.82■□□□□ 0.92
Nkx1-2P42580 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nkx1-2P42580 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Nkx1-2P42580 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Nkx1-2P42580 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.82■□□□□ 0.92
Nkx1-2P42580 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.82■□□□□ 0.92
Nkx1-2P42580 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.82■□□□□ 0.92
Nkx1-2P42580 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.82■□□□□ 0.92
Nkx1-2P42580 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nkx1-2P42580 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Nkx1-2P42580 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nkx1-2P42580 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
Nkx1-2P42580 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.82■□□□□ 0.92
Nkx1-2P42580 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nkx1-2P42580 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nkx1-2P42580 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nkx1-2P42580 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nkx1-2P42580 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nkx1-2P42580 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nkx1-2P42580 AC133083.1-201ENSMUST00000221736 2209 ntBASIC20.81■□□□□ 0.92
Nkx1-2P42580 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nkx1-2P42580 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms