Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Timp3P39876 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Timp3P39876 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Timp3P39876 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Timp3P39876 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Timp3P39876 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Timp3P39876 Gm43808-201ENSMUST00000202534 2065 ntBASIC13.89□□□□□ -0.19
Timp3P39876 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Timp3P39876 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Timp3P39876 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Timp3P39876 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Timp3P39876 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Timp3P39876 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Timp3P39876 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Timp3P39876 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Timp3P39876 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Timp3P39876 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Timp3P39876 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Timp3P39876 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Timp3P39876 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Timp3P39876 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Timp3P39876 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Timp3P39876 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Timp3P39876 Gm13401-201ENSMUST00000117074 291 ntBASIC13.88□□□□□ -0.19
Timp3P39876 Gm13474-201ENSMUST00000122466 815 ntBASIC13.88□□□□□ -0.19
Timp3P39876 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC13.88□□□□□ -0.19
Timp3P39876 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Timp3P39876 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Timp3P39876 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC13.88□□□□□ -0.19
Timp3P39876 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Timp3P39876 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Timp3P39876 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Timp3P39876 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Timp3P39876 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Timp3P39876 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
Timp3P39876 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Timp3P39876 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Timp3P39876 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Timp3P39876 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Timp3P39876 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Timp3P39876 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Timp3P39876 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Timp3P39876 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Timp3P39876 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.87□□□□□ -0.19
Timp3P39876 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Timp3P39876 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Timp3P39876 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Timp3P39876 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Timp3P39876 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Timp3P39876 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Timp3P39876 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Timp3P39876 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Timp3P39876 Gm16061-201ENSMUST00000122167 857 ntBASIC13.87□□□□□ -0.19
Timp3P39876 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Timp3P39876 AC134329.2-201ENSMUST00000217897 428 ntBASIC13.87□□□□□ -0.19
Timp3P39876 Gm18032-201ENSMUST00000222541 538 ntBASIC13.87□□□□□ -0.19
Timp3P39876 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Timp3P39876 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
Timp3P39876 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Timp3P39876 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Timp3P39876 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Timp3P39876 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.87□□□□□ -0.19
Timp3P39876 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Timp3P39876 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Timp3P39876 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Timp3P39876 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Timp3P39876 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Timp3P39876 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Timp3P39876 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Timp3P39876 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC13.86□□□□□ -0.19
Timp3P39876 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Timp3P39876 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Timp3P39876 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Timp3P39876 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Timp3P39876 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Timp3P39876 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Timp3P39876 Gm7638-201ENSMUST00000121348 967 ntBASIC13.86□□□□□ -0.19
Timp3P39876 Gm37025-201ENSMUST00000195159 829 ntBASIC13.86□□□□□ -0.19
Timp3P39876 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Timp3P39876 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC13.86□□□□□ -0.19
Timp3P39876 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Timp3P39876 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Timp3P39876 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Timp3P39876 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Timp3P39876 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Timp3P39876 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Timp3P39876 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Timp3P39876 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC13.86□□□□□ -0.19
Timp3P39876 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Timp3P39876 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Timp3P39876 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Timp3P39876 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Timp3P39876 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Timp3P39876 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Timp3P39876 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Timp3P39876 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Timp3P39876 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Timp3P39876 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Timp3P39876 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC13.85□□□□□ -0.19
Timp3P39876 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms