Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Cdh4P39038 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Cdh4P39038 Gm18959-201ENSMUST00000208954 655 ntBASIC16.23■□□□□ 0.19
Cdh4P39038 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Cdh4P39038 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdh4P39038 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cdh4P39038 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Cdh4P39038 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdh4P39038 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
Cdh4P39038 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdh4P39038 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cdh4P39038 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Cdh4P39038 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdh4P39038 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdh4P39038 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdh4P39038 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Cdh4P39038 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Cdh4P39038 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Cdh4P39038 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdh4P39038 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cdh4P39038 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.22■□□□□ 0.19
Cdh4P39038 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdh4P39038 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdh4P39038 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Cdh4P39038 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.22■□□□□ 0.19
Cdh4P39038 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cdh4P39038 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.22■□□□□ 0.19
Cdh4P39038 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.22■□□□□ 0.19
Cdh4P39038 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.22■□□□□ 0.19
Cdh4P39038 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdh4P39038 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.22■□□□□ 0.19
Cdh4P39038 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cdh4P39038 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdh4P39038 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.22■□□□□ 0.19
Cdh4P39038 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.22■□□□□ 0.19
Cdh4P39038 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdh4P39038 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdh4P39038 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.22■□□□□ 0.19
Cdh4P39038 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdh4P39038 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdh4P39038 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cdh4P39038 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdh4P39038 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdh4P39038 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdh4P39038 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Cdh4P39038 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdh4P39038 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdh4P39038 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.21■□□□□ 0.19
Cdh4P39038 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdh4P39038 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Cdh4P39038 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdh4P39038 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cdh4P39038 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdh4P39038 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cdh4P39038 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.21■□□□□ 0.19
Cdh4P39038 Gm16061-201ENSMUST00000122167 857 ntBASIC16.21■□□□□ 0.19
Cdh4P39038 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.21■□□□□ 0.19
Cdh4P39038 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cdh4P39038 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cdh4P39038 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdh4P39038 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdh4P39038 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdh4P39038 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Cdh4P39038 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdh4P39038 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cdh4P39038 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Cdh4P39038 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cdh4P39038 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh4P39038 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Cdh4P39038 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh4P39038 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Cdh4P39038 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh4P39038 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.2■□□□□ 0.18
Cdh4P39038 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh4P39038 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Cdh4P39038 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh4P39038 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh4P39038 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Cdh4P39038 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Cdh4P39038 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh4P39038 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh4P39038 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Cdh4P39038 Gm13474-201ENSMUST00000122466 815 ntBASIC16.2■□□□□ 0.18
Cdh4P39038 Gm45058-201ENSMUST00000205810 766 ntBASIC16.2■□□□□ 0.18
Cdh4P39038 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Cdh4P39038 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh4P39038 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh4P39038 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Cdh4P39038 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.2■□□□□ 0.18
Cdh4P39038 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.2■□□□□ 0.18
Cdh4P39038 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Cdh4P39038 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdh4P39038 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdh4P39038 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Cdh4P39038 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdh4P39038 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdh4P39038 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdh4P39038 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdh4P39038 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Cdh4P39038 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms