Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.54■□□□□ 0.56
Sox5P35710 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sox5P35710 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sox5P35710 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox5P35710 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox5P35710 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox5P35710 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox5P35710 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Sox5P35710 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox5P35710 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
Sox5P35710 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox5P35710 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox5P35710 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sox5P35710 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox5P35710 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.54■□□□□ 0.56
Sox5P35710 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox5P35710 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.53■□□□□ 0.56
Sox5P35710 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Sox5P35710 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox5P35710 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox5P35710 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox5P35710 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Sox5P35710 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox5P35710 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sox5P35710 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sox5P35710 Gm12382-201ENSMUST00000122005 922 ntBASIC18.53■□□□□ 0.56
Sox5P35710 Dancr-204ENSMUST00000132389 2347 ntBASIC18.53■□□□□ 0.56
Sox5P35710 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.53■□□□□ 0.56
Sox5P35710 Gm10602-201ENSMUST00000098239 609 ntBASIC18.53■□□□□ 0.56
Sox5P35710 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox5P35710 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox5P35710 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox5P35710 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox5P35710 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sox5P35710 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox5P35710 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox5P35710 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox5P35710 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sox5P35710 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sox5P35710 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sox5P35710 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sox5P35710 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sox5P35710 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Sox5P35710 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sox5P35710 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Sox5P35710 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sox5P35710 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.52■□□□□ 0.56
Sox5P35710 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
Sox5P35710 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sox5P35710 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.52■□□□□ 0.56
Sox5P35710 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sox5P35710 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sox5P35710 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sox5P35710 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sox5P35710 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Sox5P35710 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sox5P35710 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sox5P35710 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Sox5P35710 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.52■□□□□ 0.55
Sox5P35710 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sox5P35710 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.51■□□□□ 0.55
Sox5P35710 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sox5P35710 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sox5P35710 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sox5P35710 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sox5P35710 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sox5P35710 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Sox5P35710 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sox5P35710 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sox5P35710 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sox5P35710 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sox5P35710 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sox5P35710 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sox5P35710 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sox5P35710 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sox5P35710 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Sox5P35710 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Sox5P35710 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sox5P35710 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sox5P35710 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sox5P35710 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Sox5P35710 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.5■□□□□ 0.55
Sox5P35710 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.5■□□□□ 0.55
Sox5P35710 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sox5P35710 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sox5P35710 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sox5P35710 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18.5■□□□□ 0.55
Sox5P35710 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.5■□□□□ 0.55
Sox5P35710 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sox5P35710 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sox5P35710 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sox5P35710 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sox5P35710 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sox5P35710 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sox5P35710 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sox5P35710 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sox5P35710 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.49■□□□□ 0.55
Sox5P35710 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Sox5P35710 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sox5P35710 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms