Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.66■□□□□ 0.1
Thbs1P35441 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Thbs1P35441 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Thbs1P35441 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Thbs1P35441 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Thbs1P35441 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.66■□□□□ 0.1
Thbs1P35441 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Thbs1P35441 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.66■□□□□ 0.1
Thbs1P35441 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Thbs1P35441 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Thbs1P35441 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Thbs1P35441 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Thbs1P35441 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Thbs1P35441 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Thbs1P35441 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Thbs1P35441 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Thbs1P35441 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Thbs1P35441 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Thbs1P35441 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Thbs1P35441 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Thbs1P35441 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Thbs1P35441 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Thbs1P35441 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Thbs1P35441 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Thbs1P35441 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Thbs1P35441 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.65■□□□□ 0.1
Thbs1P35441 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Thbs1P35441 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Thbs1P35441 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Thbs1P35441 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Thbs1P35441 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.65■□□□□ 0.1
Thbs1P35441 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Thbs1P35441 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Thbs1P35441 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Thbs1P35441 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Thbs1P35441 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Thbs1P35441 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Thbs1P35441 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Thbs1P35441 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Thbs1P35441 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Thbs1P35441 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Thbs1P35441 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Thbs1P35441 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Thbs1P35441 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Thbs1P35441 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Thbs1P35441 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Thbs1P35441 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Thbs1P35441 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Thbs1P35441 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Thbs1P35441 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Thbs1P35441 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Thbs1P35441 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Thbs1P35441 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.64■□□□□ 0.09
Thbs1P35441 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC15.64■□□□□ 0.09
Thbs1P35441 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.64■□□□□ 0.09
Thbs1P35441 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15.64■□□□□ 0.09
Thbs1P35441 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Thbs1P35441 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.64■□□□□ 0.09
Thbs1P35441 Odf3b-204ENSMUST00000227834 930 ntBASIC15.64■□□□□ 0.09
Thbs1P35441 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Thbs1P35441 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Thbs1P35441 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Thbs1P35441 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Thbs1P35441 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Thbs1P35441 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Thbs1P35441 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Thbs1P35441 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Thbs1P35441 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Thbs1P35441 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Thbs1P35441 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Thbs1P35441 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Thbs1P35441 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Thbs1P35441 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Thbs1P35441 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Thbs1P35441 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Thbs1P35441 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Thbs1P35441 Gm7977-201ENSMUST00000193787 748 ntBASIC15.63■□□□□ 0.09
Thbs1P35441 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC15.63■□□□□ 0.09
Thbs1P35441 Arhgef33-211ENSMUST00000225658 473 ntBASIC15.63■□□□□ 0.09
Thbs1P35441 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Thbs1P35441 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Thbs1P35441 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Thbs1P35441 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Thbs1P35441 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.63■□□□□ 0.09
Thbs1P35441 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Thbs1P35441 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Thbs1P35441 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Thbs1P35441 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Thbs1P35441 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Thbs1P35441 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.62■□□□□ 0.09
Thbs1P35441 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Thbs1P35441 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Thbs1P35441 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Thbs1P35441 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Thbs1P35441 Gm715-201ENSMUST00000117865 831 ntBASIC15.62■□□□□ 0.09
Thbs1P35441 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Thbs1P35441 Gm27000-201ENSMUST00000182943 842 ntBASIC15.62■□□□□ 0.09
Thbs1P35441 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.62■□□□□ 0.09
Thbs1P35441 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.62■□□□□ 0.09
Thbs1P35441 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms