Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Slc6a11P31650 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc6a11P31650 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.11■□□□□ 0.17
Slc6a11P31650 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.11■□□□□ 0.17
Slc6a11P31650 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc6a11P31650 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.11■□□□□ 0.17
Slc6a11P31650 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Slc6a11P31650 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.11■□□□□ 0.17
Slc6a11P31650 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.11■□□□□ 0.17
Slc6a11P31650 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc6a11P31650 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc6a11P31650 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc6a11P31650 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.1■□□□□ 0.17
Slc6a11P31650 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc6a11P31650 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc6a11P31650 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc6a11P31650 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Slc6a11P31650 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc6a11P31650 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Slc6a11P31650 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.1■□□□□ 0.17
Slc6a11P31650 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Slc6a11P31650 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Slc6a11P31650 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Slc6a11P31650 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc6a11P31650 Gm6433-201ENSMUST00000118634 875 ntBASIC16.1■□□□□ 0.17
Slc6a11P31650 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Slc6a11P31650 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc6a11P31650 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Slc6a11P31650 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc6a11P31650 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Slc6a11P31650 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc6a11P31650 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Slc6a11P31650 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Slc6a11P31650 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Slc6a11P31650 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc6a11P31650 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc6a11P31650 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.1■□□□□ 0.17
Slc6a11P31650 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Slc6a11P31650 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Slc6a11P31650 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a11P31650 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a11P31650 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a11P31650 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a11P31650 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a11P31650 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a11P31650 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.09■□□□□ 0.17
Slc6a11P31650 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Slc6a11P31650 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a11P31650 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a11P31650 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a11P31650 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a11P31650 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a11P31650 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a11P31650 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a11P31650 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a11P31650 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.09■□□□□ 0.17
Slc6a11P31650 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a11P31650 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a11P31650 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a11P31650 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a11P31650 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a11P31650 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a11P31650 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Slc6a11P31650 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Slc6a11P31650 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Slc6a11P31650 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Slc6a11P31650 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Slc6a11P31650 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.08■□□□□ 0.17
Slc6a11P31650 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.08■□□□□ 0.17
Slc6a11P31650 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Slc6a11P31650 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc6a11P31650 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc6a11P31650 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc6a11P31650 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc6a11P31650 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.08■□□□□ 0.16
Slc6a11P31650 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.08■□□□□ 0.16
Slc6a11P31650 Mir5122-201ENSMUST00000175004 89 ntBASIC16.08■□□□□ 0.16
Slc6a11P31650 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc6a11P31650 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.08■□□□□ 0.16
Slc6a11P31650 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc6a11P31650 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc6a11P31650 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc6a11P31650 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Slc6a11P31650 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Slc6a11P31650 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc6a11P31650 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc6a11P31650 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc6a11P31650 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc6a11P31650 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc6a11P31650 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc6a11P31650 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.08■□□□□ 0.16
Slc6a11P31650 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Slc6a11P31650 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Slc6a11P31650 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc6a11P31650 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.07■□□□□ 0.16
Slc6a11P31650 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc6a11P31650 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc6a11P31650 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Slc6a11P31650 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc6a11P31650 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms