Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC19.5■□□□□ 0.71
Vcam1P29533 AC133598.3-202ENSMUST00000224219 531 ntBASIC19.5■□□□□ 0.71
Vcam1P29533 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Vcam1P29533 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.5■□□□□ 0.71
Vcam1P29533 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vcam1P29533 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vcam1P29533 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vcam1P29533 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Vcam1P29533 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vcam1P29533 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vcam1P29533 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Vcam1P29533 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vcam1P29533 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.49■□□□□ 0.71
Vcam1P29533 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vcam1P29533 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vcam1P29533 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Vcam1P29533 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vcam1P29533 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC19.49■□□□□ 0.71
Vcam1P29533 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
Vcam1P29533 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.49■□□□□ 0.71
Vcam1P29533 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC19.49■□□□□ 0.71
Vcam1P29533 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC19.49■□□□□ 0.71
Vcam1P29533 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Vcam1P29533 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC19.49■□□□□ 0.71
Vcam1P29533 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC19.49■□□□□ 0.71
Vcam1P29533 AC153889.1-201ENSMUST00000219257 330 ntBASIC19.49■□□□□ 0.71
Vcam1P29533 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vcam1P29533 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vcam1P29533 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Vcam1P29533 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vcam1P29533 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vcam1P29533 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vcam1P29533 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vcam1P29533 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vcam1P29533 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Vcam1P29533 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vcam1P29533 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vcam1P29533 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Vcam1P29533 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
Vcam1P29533 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Vcam1P29533 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC19.48■□□□□ 0.71
Vcam1P29533 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC19.48■□□□□ 0.71
Vcam1P29533 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Vcam1P29533 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC19.48■□□□□ 0.71
Vcam1P29533 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vcam1P29533 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vcam1P29533 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vcam1P29533 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Vcam1P29533 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.48■□□□□ 0.71
Vcam1P29533 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.48■□□□□ 0.71
Vcam1P29533 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Vcam1P29533 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vcam1P29533 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vcam1P29533 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vcam1P29533 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vcam1P29533 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vcam1P29533 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vcam1P29533 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vcam1P29533 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC19.47■□□□□ 0.71
Vcam1P29533 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC19.47■□□□□ 0.71
Vcam1P29533 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC19.47■□□□□ 0.71
Vcam1P29533 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC19.47■□□□□ 0.71
Vcam1P29533 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC19.47■□□□□ 0.71
Vcam1P29533 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vcam1P29533 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vcam1P29533 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Vcam1P29533 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vcam1P29533 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vcam1P29533 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vcam1P29533 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vcam1P29533 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vcam1P29533 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vcam1P29533 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vcam1P29533 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vcam1P29533 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Vcam1P29533 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vcam1P29533 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vcam1P29533 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vcam1P29533 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vcam1P29533 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vcam1P29533 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vcam1P29533 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vcam1P29533 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.46■□□□□ 0.71
Vcam1P29533 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vcam1P29533 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vcam1P29533 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vcam1P29533 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
Vcam1P29533 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vcam1P29533 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vcam1P29533 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.45■□□□□ 0.7
Vcam1P29533 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Vcam1P29533 Gm27459-201ENSMUST00000184860 107 ntBASIC19.45■□□□□ 0.7
Vcam1P29533 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vcam1P29533 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Vcam1P29533 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vcam1P29533 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vcam1P29533 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
Vcam1P29533 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Vcam1P29533 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vcam1P29533 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms