Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.43■□□□□ 0.38
Nfkb1P25799 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Nfkb1P25799 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nfkb1P25799 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Nfkb1P25799 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nfkb1P25799 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Nfkb1P25799 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.42■□□□□ 0.38
Nfkb1P25799 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nfkb1P25799 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nfkb1P25799 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Nfkb1P25799 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Nfkb1P25799 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nfkb1P25799 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nfkb1P25799 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Nfkb1P25799 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nfkb1P25799 Gm27704-201ENSMUST00000185094 107 ntBASIC17.42■□□□□ 0.38
Nfkb1P25799 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Nfkb1P25799 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nfkb1P25799 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nfkb1P25799 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nfkb1P25799 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nfkb1P25799 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nfkb1P25799 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nfkb1P25799 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nfkb1P25799 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nfkb1P25799 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nfkb1P25799 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
Nfkb1P25799 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nfkb1P25799 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nfkb1P25799 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nfkb1P25799 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nfkb1P25799 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nfkb1P25799 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Nfkb1P25799 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.41■□□□□ 0.38
Nfkb1P25799 Gm27000-201ENSMUST00000182943 842 ntBASIC17.41■□□□□ 0.38
Nfkb1P25799 Gm37722-201ENSMUST00000193757 208 ntBASIC17.41■□□□□ 0.38
Nfkb1P25799 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nfkb1P25799 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.41■□□□□ 0.38
Nfkb1P25799 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nfkb1P25799 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nfkb1P25799 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nfkb1P25799 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nfkb1P25799 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nfkb1P25799 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nfkb1P25799 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nfkb1P25799 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nfkb1P25799 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nfkb1P25799 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nfkb1P25799 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nfkb1P25799 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nfkb1P25799 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nfkb1P25799 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Nfkb1P25799 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.39■□□□□ 0.37
Nfkb1P25799 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nfkb1P25799 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nfkb1P25799 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.39■□□□□ 0.37
Nfkb1P25799 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.39■□□□□ 0.37
Nfkb1P25799 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nfkb1P25799 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Nfkb1P25799 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nfkb1P25799 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nfkb1P25799 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.39■□□□□ 0.37
Nfkb1P25799 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nfkb1P25799 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nfkb1P25799 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nfkb1P25799 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nfkb1P25799 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.38■□□□□ 0.37
Nfkb1P25799 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nfkb1P25799 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nfkb1P25799 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nfkb1P25799 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nfkb1P25799 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nfkb1P25799 Gm9103-201ENSMUST00000119371 405 ntBASIC17.38■□□□□ 0.37
Nfkb1P25799 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Nfkb1P25799 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nfkb1P25799 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nfkb1P25799 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.38■□□□□ 0.37
Nfkb1P25799 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Nfkb1P25799 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nfkb1P25799 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nfkb1P25799 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Nfkb1P25799 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nfkb1P25799 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.37■□□□□ 0.37
Nfkb1P25799 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.37■□□□□ 0.37
Nfkb1P25799 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nfkb1P25799 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nfkb1P25799 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Nfkb1P25799 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Nfkb1P25799 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.37■□□□□ 0.37
Nfkb1P25799 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nfkb1P25799 Gm11950-201ENSMUST00000121615 838 ntBASIC17.37■□□□□ 0.37
Nfkb1P25799 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.37■□□□□ 0.37
Nfkb1P25799 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Nfkb1P25799 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nfkb1P25799 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nfkb1P25799 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nfkb1P25799 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nfkb1P25799 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Nfkb1P25799 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.37■□□□□ 0.37
Nfkb1P25799 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms